Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
RASGEF1AQ8N9B8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RASGEF1AQ8N9B8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RASGEF1AQ8N9B8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RASGEF1AQ8N9B8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RASGEF1AQ8N9B8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.39■■□□□ 1.17
RASGEF1AQ8N9B8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.39■■□□□ 1.17
RASGEF1AQ8N9B8 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.39■■□□□ 1.17
RASGEF1AQ8N9B8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
RASGEF1AQ8N9B8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RASGEF1AQ8N9B8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RASGEF1AQ8N9B8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RASGEF1AQ8N9B8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
RASGEF1AQ8N9B8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RASGEF1AQ8N9B8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RASGEF1AQ8N9B8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RASGEF1AQ8N9B8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RASGEF1AQ8N9B8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
RASGEF1AQ8N9B8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.38■■□□□ 1.17
RASGEF1AQ8N9B8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.38■■□□□ 1.17
RASGEF1AQ8N9B8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RASGEF1AQ8N9B8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RASGEF1AQ8N9B8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RASGEF1AQ8N9B8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RASGEF1AQ8N9B8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RASGEF1AQ8N9B8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RASGEF1AQ8N9B8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RASGEF1AQ8N9B8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RASGEF1AQ8N9B8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RASGEF1AQ8N9B8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RASGEF1AQ8N9B8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.37■■□□□ 1.17
RASGEF1AQ8N9B8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RASGEF1AQ8N9B8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.36■■□□□ 1.17
RASGEF1AQ8N9B8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.36■■□□□ 1.17
RASGEF1AQ8N9B8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.36■■□□□ 1.17
RASGEF1AQ8N9B8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RASGEF1AQ8N9B8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RASGEF1AQ8N9B8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.36■■□□□ 1.17
RASGEF1AQ8N9B8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RASGEF1AQ8N9B8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.36■■□□□ 1.17
RASGEF1AQ8N9B8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RASGEF1AQ8N9B8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RASGEF1AQ8N9B8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RASGEF1AQ8N9B8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.35■■□□□ 1.17
RASGEF1AQ8N9B8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.35■■□□□ 1.17
RASGEF1AQ8N9B8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RASGEF1AQ8N9B8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RASGEF1AQ8N9B8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RASGEF1AQ8N9B8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.34■■□□□ 1.17
RASGEF1AQ8N9B8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RASGEF1AQ8N9B8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RASGEF1AQ8N9B8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RASGEF1AQ8N9B8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.34■■□□□ 1.17
RASGEF1AQ8N9B8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RASGEF1AQ8N9B8 AC131281.2-201ENST00000520478 145 ntBASIC22.34■■□□□ 1.17
RASGEF1AQ8N9B8 AL512631.2-201ENST00000604634 923 ntBASIC22.34■■□□□ 1.17
RASGEF1AQ8N9B8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.34■■□□□ 1.17
RASGEF1AQ8N9B8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RASGEF1AQ8N9B8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RASGEF1AQ8N9B8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RASGEF1AQ8N9B8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RASGEF1AQ8N9B8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RASGEF1AQ8N9B8 AC009102.2-201ENST00000606772 1639 ntBASIC22.33■■□□□ 1.17
RASGEF1AQ8N9B8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RASGEF1AQ8N9B8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
RASGEF1AQ8N9B8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RASGEF1AQ8N9B8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RASGEF1AQ8N9B8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
RASGEF1AQ8N9B8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RASGEF1AQ8N9B8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RASGEF1AQ8N9B8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RASGEF1AQ8N9B8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RASGEF1AQ8N9B8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 MIR4466-201ENST00000606121 54 ntBASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.32■■□□□ 1.16
RASGEF1AQ8N9B8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.31■■□□□ 1.16
RASGEF1AQ8N9B8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RASGEF1AQ8N9B8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RASGEF1AQ8N9B8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RASGEF1AQ8N9B8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RASGEF1AQ8N9B8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RASGEF1AQ8N9B8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.31■■□□□ 1.16
RASGEF1AQ8N9B8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.31■■□□□ 1.16
RASGEF1AQ8N9B8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RASGEF1AQ8N9B8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
RASGEF1AQ8N9B8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RASGEF1AQ8N9B8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RASGEF1AQ8N9B8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms