Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
LINC00471Q8N535 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00471Q8N535 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LINC00471Q8N535 DUX4L9-201ENST00000449051 1259 ntBASIC20.72■□□□□ 0.91
LINC00471Q8N535 AC022616.5-201ENST00000518796 181 ntBASIC20.72■□□□□ 0.91
LINC00471Q8N535 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00471Q8N535 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.72■□□□□ 0.91
LINC00471Q8N535 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.72■□□□□ 0.91
LINC00471Q8N535 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00471Q8N535 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00471Q8N535 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.71■□□□□ 0.91
LINC00471Q8N535 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00471Q8N535 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00471Q8N535 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LINC00471Q8N535 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LINC00471Q8N535 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LINC00471Q8N535 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00471Q8N535 AC131274.2-201ENST00000580697 1507 ntBASIC20.71■□□□□ 0.91
LINC00471Q8N535 C1orf229-201ENST00000623686 2258 ntBASIC20.71■□□□□ 0.91
LINC00471Q8N535 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00471Q8N535 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.71■□□□□ 0.91
LINC00471Q8N535 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00471Q8N535 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LINC00471Q8N535 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00471Q8N535 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00471Q8N535 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
LINC00471Q8N535 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00471Q8N535 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00471Q8N535 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00471Q8N535 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.7■□□□□ 0.9
LINC00471Q8N535 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.7■□□□□ 0.9
LINC00471Q8N535 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00471Q8N535 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00471Q8N535 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC00471Q8N535 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00471Q8N535 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00471Q8N535 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
LINC00471Q8N535 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00471Q8N535 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00471Q8N535 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00471Q8N535 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00471Q8N535 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00471Q8N535 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC00471Q8N535 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LINC00471Q8N535 AC127496.7-201ENST00000625110 1798 ntBASIC20.69■□□□□ 0.9
LINC00471Q8N535 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC00471Q8N535 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00471Q8N535 ESRRAP2-201ENST00000418437 1549 ntBASIC20.68■□□□□ 0.9
LINC00471Q8N535 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00471Q8N535 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00471Q8N535 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00471Q8N535 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00471Q8N535 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LINC00471Q8N535 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00471Q8N535 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LINC00471Q8N535 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LINC00471Q8N535 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00471Q8N535 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00471Q8N535 ECEL1P1-201ENST00000373592 1742 ntBASIC20.67■□□□□ 0.9
LINC00471Q8N535 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LINC00471Q8N535 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00471Q8N535 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LINC00471Q8N535 GUSBP5-202ENST00000510805 1989 ntBASIC20.67■□□□□ 0.9
LINC00471Q8N535 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00471Q8N535 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LINC00471Q8N535 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.67■□□□□ 0.9
LINC00471Q8N535 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
LINC00471Q8N535 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00471Q8N535 LINC00526-201ENST00000581067 1875 ntBASIC20.67■□□□□ 0.9
LINC00471Q8N535 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00471Q8N535 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00471Q8N535 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.66■□□□□ 0.9
LINC00471Q8N535 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.66■□□□□ 0.9
LINC00471Q8N535 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.66■□□□□ 0.9
LINC00471Q8N535 AC019171.1-201ENST00000601251 1056 ntBASIC20.66■□□□□ 0.9
LINC00471Q8N535 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00471Q8N535 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LINC00471Q8N535 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.65■□□□□ 0.9
LINC00471Q8N535 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00471Q8N535 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00471Q8N535 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00471Q8N535 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00471Q8N535 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00471Q8N535 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00471Q8N535 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00471Q8N535 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
LINC00471Q8N535 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00471Q8N535 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
LINC00471Q8N535 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00471Q8N535 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00471Q8N535 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC00471Q8N535 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC00471Q8N535 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00471Q8N535 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC00471Q8N535 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.64■□□□□ 0.89
LINC00471Q8N535 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00471Q8N535 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC00471Q8N535 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
LINC00471Q8N535 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC00471Q8N535 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms