Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.79■■□□□ 1.56
ZC3H3Q8IXZ2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.79■■□□□ 1.56
ZC3H3Q8IXZ2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ZC3H3Q8IXZ2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZC3H3Q8IXZ2 AC012676.1-201ENST00000574705 1949 ntBASIC24.78■■□□□ 1.56
ZC3H3Q8IXZ2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.78■■□□□ 1.56
ZC3H3Q8IXZ2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZC3H3Q8IXZ2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ZC3H3Q8IXZ2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZC3H3Q8IXZ2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZC3H3Q8IXZ2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ZC3H3Q8IXZ2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.78■■□□□ 1.56
ZC3H3Q8IXZ2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.78■■□□□ 1.56
ZC3H3Q8IXZ2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZC3H3Q8IXZ2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
ZC3H3Q8IXZ2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.77■■□□□ 1.56
ZC3H3Q8IXZ2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H3Q8IXZ2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H3Q8IXZ2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H3Q8IXZ2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
ZC3H3Q8IXZ2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H3Q8IXZ2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H3Q8IXZ2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H3Q8IXZ2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
ZC3H3Q8IXZ2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H3Q8IXZ2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H3Q8IXZ2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H3Q8IXZ2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.76■■□□□ 1.55
ZC3H3Q8IXZ2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.76■■□□□ 1.55
ZC3H3Q8IXZ2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
ZC3H3Q8IXZ2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZC3H3Q8IXZ2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZC3H3Q8IXZ2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ZC3H3Q8IXZ2 MIR6722-201ENST00000617286 78 ntBASIC24.75■■□□□ 1.55
ZC3H3Q8IXZ2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.75■■□□□ 1.55
ZC3H3Q8IXZ2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
ZC3H3Q8IXZ2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ZC3H3Q8IXZ2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ZC3H3Q8IXZ2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ZC3H3Q8IXZ2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ZC3H3Q8IXZ2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ZC3H3Q8IXZ2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ZC3H3Q8IXZ2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ZC3H3Q8IXZ2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
ZC3H3Q8IXZ2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
ZC3H3Q8IXZ2 BX664725.1-201ENST00000438252 379 ntBASIC24.73■■□□□ 1.55
ZC3H3Q8IXZ2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.73■■□□□ 1.55
ZC3H3Q8IXZ2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
ZC3H3Q8IXZ2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ZC3H3Q8IXZ2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ZC3H3Q8IXZ2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 Z92544.1-202ENST00000571933 1220 ntBASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ZC3H3Q8IXZ2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
ZC3H3Q8IXZ2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.71■■□□□ 1.55
ZC3H3Q8IXZ2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ZC3H3Q8IXZ2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.71■■□□□ 1.55
ZC3H3Q8IXZ2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.71■■□□□ 1.55
ZC3H3Q8IXZ2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.71■■□□□ 1.55
ZC3H3Q8IXZ2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ZC3H3Q8IXZ2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ZC3H3Q8IXZ2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ZC3H3Q8IXZ2 AC133561.1-201ENST00000568600 2415 ntBASIC24.71■■□□□ 1.55
ZC3H3Q8IXZ2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
ZC3H3Q8IXZ2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
ZC3H3Q8IXZ2 AC079630.1-202ENST00000618127 1840 ntBASIC24.7■■□□□ 1.55
ZC3H3Q8IXZ2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ZC3H3Q8IXZ2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.54
ZC3H3Q8IXZ2 C9orf163-202ENST00000624034 2573 ntBASIC24.7■■□□□ 1.54
ZC3H3Q8IXZ2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.7■■□□□ 1.54
ZC3H3Q8IXZ2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
ZC3H3Q8IXZ2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms