Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AP001330.3-201ENST00000520123 633 ntBASIC25.41■■□□□ 1.66
TRIM50Q86XT4 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.41■■□□□ 1.66
TRIM50Q86XT4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.41■■□□□ 1.66
TRIM50Q86XT4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM50Q86XT4 ALDH1A3-203ENST00000557963 1670 ntBASIC25.41■■□□□ 1.66
TRIM50Q86XT4 AP003733.4-201ENST00000623785 1697 ntBASIC25.41■■□□□ 1.66
TRIM50Q86XT4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM50Q86XT4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM50Q86XT4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.41■■□□□ 1.66
TRIM50Q86XT4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
TRIM50Q86XT4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM50Q86XT4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.4■■□□□ 1.66
TRIM50Q86XT4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM50Q86XT4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM50Q86XT4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.4■■□□□ 1.66
TRIM50Q86XT4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM50Q86XT4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.4■■□□□ 1.66
TRIM50Q86XT4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.4■■□□□ 1.66
TRIM50Q86XT4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM50Q86XT4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM50Q86XT4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.39■■□□□ 1.66
TRIM50Q86XT4 AC092171.4-201ENST00000609130 632 ntBASIC25.39■■□□□ 1.66
TRIM50Q86XT4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
TRIM50Q86XT4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRIM50Q86XT4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.39■■□□□ 1.65
TRIM50Q86XT4 AC020928.2-201ENST00000588717 2197 ntBASIC25.38■■□□□ 1.65
TRIM50Q86XT4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM50Q86XT4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM50Q86XT4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.38■■□□□ 1.65
TRIM50Q86XT4 AL136967.2-201ENST00000623968 743 ntBASIC25.38■■□□□ 1.65
TRIM50Q86XT4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM50Q86XT4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM50Q86XT4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM50Q86XT4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM50Q86XT4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM50Q86XT4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.37■■□□□ 1.65
TRIM50Q86XT4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM50Q86XT4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.37■■□□□ 1.65
TRIM50Q86XT4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM50Q86XT4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM50Q86XT4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM50Q86XT4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.37■■□□□ 1.65
TRIM50Q86XT4 MIR939-201ENST00000401314 82 ntBASIC25.37■■□□□ 1.65
TRIM50Q86XT4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM50Q86XT4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.37■■□□□ 1.65
TRIM50Q86XT4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM50Q86XT4 AC142381.3-201ENST00000568208 1670 ntBASIC25.36■■□□□ 1.65
TRIM50Q86XT4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM50Q86XT4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM50Q86XT4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM50Q86XT4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM50Q86XT4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM50Q86XT4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.35■■□□□ 1.65
TRIM50Q86XT4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.35■■□□□ 1.65
TRIM50Q86XT4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
TRIM50Q86XT4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM50Q86XT4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
TRIM50Q86XT4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.35■■□□□ 1.65
TRIM50Q86XT4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM50Q86XT4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM50Q86XT4 AC105265.2-201ENST00000467189 838 ntBASIC25.34■■□□□ 1.65
TRIM50Q86XT4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM50Q86XT4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.34■■□□□ 1.65
TRIM50Q86XT4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.34■■□□□ 1.65
TRIM50Q86XT4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM50Q86XT4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM50Q86XT4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM50Q86XT4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.33■■□□□ 1.65
TRIM50Q86XT4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
TRIM50Q86XT4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.33■■□□□ 1.65
TRIM50Q86XT4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
TRIM50Q86XT4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM50Q86XT4 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.33■■□□□ 1.65
TRIM50Q86XT4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM50Q86XT4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
TRIM50Q86XT4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
TRIM50Q86XT4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM50Q86XT4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM50Q86XT4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM50Q86XT4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.32■■□□□ 1.64
TRIM50Q86XT4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
TRIM50Q86XT4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
TRIM50Q86XT4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.31■■□□□ 1.64
TRIM50Q86XT4 AC011298.3-201ENST00000615796 283 ntBASIC25.31■■□□□ 1.64
TRIM50Q86XT4 AC009086.3-201ENST00000623486 1008 ntBASIC25.31■■□□□ 1.64
TRIM50Q86XT4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
TRIM50Q86XT4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM50Q86XT4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM50Q86XT4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM50Q86XT4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM50Q86XT4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM50Q86XT4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
TRIM50Q86XT4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.3■■□□□ 1.64
TRIM50Q86XT4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM50Q86XT4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
TRIM50Q86XT4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.3■■□□□ 1.64
TRIM50Q86XT4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.3■■□□□ 1.64
TRIM50Q86XT4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.3■■□□□ 1.64
TRIM50Q86XT4 AC241377.3-202ENST00000626088 1088 ntBASIC25.3■■□□□ 1.64
TRIM50Q86XT4 AC241585.3-202ENST00000628937 1088 ntBASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms