Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NFE4Q86UQ8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NFE4Q86UQ8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NFE4Q86UQ8 KRT8P33-201ENST00000508125 1423 ntBASIC16.11■□□□□ 0.17
NFE4Q86UQ8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 AL121603.2-201ENST00000557373 2117 ntBASIC16.1■□□□□ 0.17
NFE4Q86UQ8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NFE4Q86UQ8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NFE4Q86UQ8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.09■□□□□ 0.17
NFE4Q86UQ8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.09■□□□□ 0.17
NFE4Q86UQ8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.09■□□□□ 0.17
NFE4Q86UQ8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.09■□□□□ 0.17
NFE4Q86UQ8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.09■□□□□ 0.17
NFE4Q86UQ8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NFE4Q86UQ8 EP400NL-214ENST00000641289 2402 ntBASIC16.09■□□□□ 0.17
NFE4Q86UQ8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.09■□□□□ 0.17
NFE4Q86UQ8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NFE4Q86UQ8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
NFE4Q86UQ8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NFE4Q86UQ8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
NFE4Q86UQ8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NFE4Q86UQ8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.08■□□□□ 0.17
NFE4Q86UQ8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NFE4Q86UQ8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.08■□□□□ 0.16
NFE4Q86UQ8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.08■□□□□ 0.16
NFE4Q86UQ8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.08■□□□□ 0.16
NFE4Q86UQ8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.08■□□□□ 0.16
NFE4Q86UQ8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.08■□□□□ 0.16
NFE4Q86UQ8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NFE4Q86UQ8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NFE4Q86UQ8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NFE4Q86UQ8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.08■□□□□ 0.16
NFE4Q86UQ8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.08■□□□□ 0.16
NFE4Q86UQ8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
NFE4Q86UQ8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NFE4Q86UQ8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.07■□□□□ 0.16
NFE4Q86UQ8 LONRF2P2-201ENST00000439212 571 ntBASIC16.07■□□□□ 0.16
NFE4Q86UQ8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NFE4Q86UQ8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.07■□□□□ 0.16
NFE4Q86UQ8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NFE4Q86UQ8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NFE4Q86UQ8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NFE4Q86UQ8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NFE4Q86UQ8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFE4Q86UQ8 RNF165-205ENST00000588679 2904 ntBASIC16.05■□□□□ 0.16
NFE4Q86UQ8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 AL031848.2-201ENST00000607670 837 ntBASIC16.05■□□□□ 0.16
NFE4Q86UQ8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFE4Q86UQ8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFE4Q86UQ8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFE4Q86UQ8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFE4Q86UQ8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFE4Q86UQ8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NFE4Q86UQ8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFE4Q86UQ8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFE4Q86UQ8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFE4Q86UQ8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms