Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSMD2Q7Z408 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD2Q7Z408 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD2Q7Z408 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD2Q7Z408 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD2Q7Z408 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD2Q7Z408 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.43■□□□□ 0.7
CSMD2Q7Z408 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.43■□□□□ 0.7
CSMD2Q7Z408 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD2Q7Z408 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSMD2Q7Z408 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.42■□□□□ 0.7
CSMD2Q7Z408 AC080038.1-201ENST00000611274 1154 ntBASIC19.42■□□□□ 0.7
CSMD2Q7Z408 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.42■□□□□ 0.7
CSMD2Q7Z408 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CSMD2Q7Z408 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
CSMD2Q7Z408 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.42■□□□□ 0.7
CSMD2Q7Z408 MIR6084-201ENST00000622012 110 ntBASIC19.42■□□□□ 0.7
CSMD2Q7Z408 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSMD2Q7Z408 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSMD2Q7Z408 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSMD2Q7Z408 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.42■□□□□ 0.7
CSMD2Q7Z408 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSMD2Q7Z408 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSMD2Q7Z408 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSMD2Q7Z408 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSMD2Q7Z408 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 NCF1B-203ENST00000435988 1254 ntBASIC19.41■□□□□ 0.7
CSMD2Q7Z408 AC012414.1-201ENST00000556676 535 ntBASIC19.41■□□□□ 0.7
CSMD2Q7Z408 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.41■□□□□ 0.7
CSMD2Q7Z408 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSMD2Q7Z408 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.4■□□□□ 0.7
CSMD2Q7Z408 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSMD2Q7Z408 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.4■□□□□ 0.7
CSMD2Q7Z408 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CSMD2Q7Z408 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSMD2Q7Z408 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSMD2Q7Z408 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CSMD2Q7Z408 TMEM191A-211ENST00000637163 1067 ntBASIC19.4■□□□□ 0.7
CSMD2Q7Z408 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSMD2Q7Z408 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSMD2Q7Z408 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSMD2Q7Z408 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSMD2Q7Z408 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CSMD2Q7Z408 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CSMD2Q7Z408 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.39■□□□□ 0.7
CSMD2Q7Z408 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSMD2Q7Z408 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.39■□□□□ 0.69
CSMD2Q7Z408 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CSMD2Q7Z408 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CSMD2Q7Z408 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSMD2Q7Z408 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSMD2Q7Z408 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSMD2Q7Z408 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.39■□□□□ 0.69
CSMD2Q7Z408 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.39■□□□□ 0.69
CSMD2Q7Z408 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.39■□□□□ 0.69
CSMD2Q7Z408 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.39■□□□□ 0.69
CSMD2Q7Z408 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSMD2Q7Z408 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
CSMD2Q7Z408 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSMD2Q7Z408 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSMD2Q7Z408 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSMD2Q7Z408 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.38■□□□□ 0.69
CSMD2Q7Z408 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CSMD2Q7Z408 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.38■□□□□ 0.69
CSMD2Q7Z408 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSMD2Q7Z408 AC026185.1-201ENST00000445748 174 ntBASIC19.38■□□□□ 0.69
CSMD2Q7Z408 AC093827.2-201ENST00000512654 315 ntBASIC19.38■□□□□ 0.69
CSMD2Q7Z408 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.38■□□□□ 0.69
CSMD2Q7Z408 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.38■□□□□ 0.69
CSMD2Q7Z408 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSMD2Q7Z408 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CSMD2Q7Z408 MIR4651-201ENST00000582622 73 ntBASIC19.38■□□□□ 0.69
CSMD2Q7Z408 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSMD2Q7Z408 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.37■□□□□ 0.69
CSMD2Q7Z408 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.37■□□□□ 0.69
CSMD2Q7Z408 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.37■□□□□ 0.69
CSMD2Q7Z408 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.37■□□□□ 0.69
CSMD2Q7Z408 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSMD2Q7Z408 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.37■□□□□ 0.69
CSMD2Q7Z408 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSMD2Q7Z408 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSMD2Q7Z408 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSMD2Q7Z408 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.36■□□□□ 0.69
CSMD2Q7Z408 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.36■□□□□ 0.69
CSMD2Q7Z408 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.36■□□□□ 0.69
CSMD2Q7Z408 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSMD2Q7Z408 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CSMD2Q7Z408 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms