Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COPS6Q7L5N1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COPS6Q7L5N1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
COPS6Q7L5N1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COPS6Q7L5N1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COPS6Q7L5N1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
COPS6Q7L5N1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
COPS6Q7L5N1 AC006455.2-201ENST00000429931 906 ntBASIC28.88■■■□□ 2.21
COPS6Q7L5N1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
COPS6Q7L5N1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
COPS6Q7L5N1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
COPS6Q7L5N1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.88■■■□□ 2.21
COPS6Q7L5N1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.88■■■□□ 2.21
COPS6Q7L5N1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.88■■■□□ 2.21
COPS6Q7L5N1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COPS6Q7L5N1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
COPS6Q7L5N1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
COPS6Q7L5N1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.87■■■□□ 2.21
COPS6Q7L5N1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
COPS6Q7L5N1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28.87■■■□□ 2.21
COPS6Q7L5N1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.87■■■□□ 2.21
COPS6Q7L5N1 AF213884.3-201ENST00000563833 479 ntBASIC28.87■■■□□ 2.21
COPS6Q7L5N1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.87■■■□□ 2.21
COPS6Q7L5N1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.86■■■□□ 2.21
COPS6Q7L5N1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC28.86■■■□□ 2.21
COPS6Q7L5N1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COPS6Q7L5N1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
COPS6Q7L5N1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
COPS6Q7L5N1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COPS6Q7L5N1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
COPS6Q7L5N1 MIR939-201ENST00000401314 82 ntBASIC28.85■■■□□ 2.21
COPS6Q7L5N1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
COPS6Q7L5N1 AP001330.3-201ENST00000520123 633 ntBASIC28.85■■■□□ 2.21
COPS6Q7L5N1 AC241377.3-202ENST00000626088 1088 ntBASIC28.85■■■□□ 2.21
COPS6Q7L5N1 AC241585.3-202ENST00000628937 1088 ntBASIC28.85■■■□□ 2.21
COPS6Q7L5N1 AC245100.8-202ENST00000629247 1058 ntBASIC28.85■■■□□ 2.21
COPS6Q7L5N1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COPS6Q7L5N1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC28.85■■■□□ 2.21
COPS6Q7L5N1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COPS6Q7L5N1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.85■■■□□ 2.21
COPS6Q7L5N1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.84■■■□□ 2.21
COPS6Q7L5N1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
COPS6Q7L5N1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.84■■■□□ 2.21
COPS6Q7L5N1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.84■■■□□ 2.21
COPS6Q7L5N1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COPS6Q7L5N1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COPS6Q7L5N1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
COPS6Q7L5N1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
COPS6Q7L5N1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COPS6Q7L5N1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.83■■■□□ 2.21
COPS6Q7L5N1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COPS6Q7L5N1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
COPS6Q7L5N1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.83■■■□□ 2.21
COPS6Q7L5N1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COPS6Q7L5N1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COPS6Q7L5N1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COPS6Q7L5N1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
COPS6Q7L5N1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COPS6Q7L5N1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COPS6Q7L5N1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
COPS6Q7L5N1 AL138724.1-201ENST00000606771 1088 ntBASIC28.82■■■□□ 2.2
COPS6Q7L5N1 AC011298.3-201ENST00000615796 283 ntBASIC28.82■■■□□ 2.2
COPS6Q7L5N1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
COPS6Q7L5N1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
COPS6Q7L5N1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COPS6Q7L5N1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COPS6Q7L5N1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC28.81■■■□□ 2.2
COPS6Q7L5N1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
COPS6Q7L5N1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.81■■■□□ 2.2
COPS6Q7L5N1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
COPS6Q7L5N1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
COPS6Q7L5N1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
COPS6Q7L5N1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
COPS6Q7L5N1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
COPS6Q7L5N1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.8■■■□□ 2.2
COPS6Q7L5N1 HES6-206ENST00000409574 738 ntTSL 2 BASIC28.8■■■□□ 2.2
COPS6Q7L5N1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.8■■■□□ 2.2
COPS6Q7L5N1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC28.8■■■□□ 2.2
COPS6Q7L5N1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC28.8■■■□□ 2.2
COPS6Q7L5N1 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.8■■■□□ 2.2
COPS6Q7L5N1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.79■■■□□ 2.2
COPS6Q7L5N1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.79■■■□□ 2.2
COPS6Q7L5N1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC28.79■■■□□ 2.2
COPS6Q7L5N1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.79■■■□□ 2.2
COPS6Q7L5N1 MIR3181-201ENST00000578512 73 ntBASIC28.79■■■□□ 2.2
COPS6Q7L5N1 AC009086.3-201ENST00000623486 1008 ntBASIC28.79■■■□□ 2.2
COPS6Q7L5N1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC28.79■■■□□ 2.2
COPS6Q7L5N1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
COPS6Q7L5N1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.79■■■□□ 2.2
COPS6Q7L5N1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
COPS6Q7L5N1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COPS6Q7L5N1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.78■■■□□ 2.2
COPS6Q7L5N1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC28.78■■■□□ 2.2
COPS6Q7L5N1 AC105265.2-201ENST00000467189 838 ntBASIC28.78■■■□□ 2.2
COPS6Q7L5N1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
COPS6Q7L5N1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
COPS6Q7L5N1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
COPS6Q7L5N1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
COPS6Q7L5N1 EED-207ENST00000528180 1745 ntTSL 5 BASIC28.77■■■□□ 2.2
COPS6Q7L5N1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms