Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BLOC1S3Q6QNY0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BLOC1S3Q6QNY0 DUX4L9-201ENST00000449051 1259 ntBASIC21.67■■□□□ 1.06
BLOC1S3Q6QNY0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.67■■□□□ 1.06
BLOC1S3Q6QNY0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BLOC1S3Q6QNY0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BLOC1S3Q6QNY0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
BLOC1S3Q6QNY0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.65■■□□□ 1.06
BLOC1S3Q6QNY0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S3Q6QNY0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.65■■□□□ 1.06
BLOC1S3Q6QNY0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S3Q6QNY0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
BLOC1S3Q6QNY0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BLOC1S3Q6QNY0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
BLOC1S3Q6QNY0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BLOC1S3Q6QNY0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BLOC1S3Q6QNY0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BLOC1S3Q6QNY0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BLOC1S3Q6QNY0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.64■■□□□ 1.05
BLOC1S3Q6QNY0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
BLOC1S3Q6QNY0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
BLOC1S3Q6QNY0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
BLOC1S3Q6QNY0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BLOC1S3Q6QNY0 ECEL1P1-201ENST00000373592 1742 ntBASIC21.63■■□□□ 1.05
BLOC1S3Q6QNY0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.63■■□□□ 1.05
BLOC1S3Q6QNY0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S3Q6QNY0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.63■■□□□ 1.05
BLOC1S3Q6QNY0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.63■■□□□ 1.05
BLOC1S3Q6QNY0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S3Q6QNY0 AC011551.1-201ENST00000614101 683 ntBASIC21.63■■□□□ 1.05
BLOC1S3Q6QNY0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S3Q6QNY0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.63■■□□□ 1.05
BLOC1S3Q6QNY0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BLOC1S3Q6QNY0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BLOC1S3Q6QNY0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BLOC1S3Q6QNY0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BLOC1S3Q6QNY0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BLOC1S3Q6QNY0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.62■■□□□ 1.05
BLOC1S3Q6QNY0 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.62■■□□□ 1.05
BLOC1S3Q6QNY0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.62■■□□□ 1.05
BLOC1S3Q6QNY0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BLOC1S3Q6QNY0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.62■■□□□ 1.05
BLOC1S3Q6QNY0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.62■■□□□ 1.05
BLOC1S3Q6QNY0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BLOC1S3Q6QNY0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.61■■□□□ 1.05
BLOC1S3Q6QNY0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.61■■□□□ 1.05
BLOC1S3Q6QNY0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.61■■□□□ 1.05
BLOC1S3Q6QNY0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S3Q6QNY0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S3Q6QNY0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S3Q6QNY0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BLOC1S3Q6QNY0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
BLOC1S3Q6QNY0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.61■■□□□ 1.05
BLOC1S3Q6QNY0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BLOC1S3Q6QNY0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.59■■□□□ 1.05
BLOC1S3Q6QNY0 AC127496.7-201ENST00000625110 1798 ntBASIC21.59■■□□□ 1.05
BLOC1S3Q6QNY0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.59■■□□□ 1.05
BLOC1S3Q6QNY0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.59■■□□□ 1.05
BLOC1S3Q6QNY0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S3Q6QNY0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S3Q6QNY0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S3Q6QNY0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
BLOC1S3Q6QNY0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BLOC1S3Q6QNY0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.59■■□□□ 1.05
BLOC1S3Q6QNY0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms