Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN4Q6PJG9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN4Q6PJG9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN4Q6PJG9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRFN4Q6PJG9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRFN4Q6PJG9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.28■□□□□ 0.84
LRFN4Q6PJG9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRFN4Q6PJG9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRFN4Q6PJG9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LRFN4Q6PJG9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.28■□□□□ 0.84
LRFN4Q6PJG9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.28■□□□□ 0.84
LRFN4Q6PJG9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRFN4Q6PJG9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRFN4Q6PJG9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRFN4Q6PJG9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.27■□□□□ 0.83
LRFN4Q6PJG9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRFN4Q6PJG9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN4Q6PJG9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN4Q6PJG9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN4Q6PJG9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN4Q6PJG9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRFN4Q6PJG9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 AC004448.1-201ENST00000458332 883 ntBASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LRFN4Q6PJG9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.24■□□□□ 0.83
LRFN4Q6PJG9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN4Q6PJG9 AC021242.3-201ENST00000607598 1377 ntBASIC20.23■□□□□ 0.83
LRFN4Q6PJG9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN4Q6PJG9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN4Q6PJG9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LRFN4Q6PJG9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN4Q6PJG9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.23■□□□□ 0.83
LRFN4Q6PJG9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN4Q6PJG9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.23■□□□□ 0.83
LRFN4Q6PJG9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LRFN4Q6PJG9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN4Q6PJG9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN4Q6PJG9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms