Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CDCP2Q5VXM1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.73■■□□□ 1.07
CDCP2Q5VXM1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDCP2Q5VXM1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.73■■□□□ 1.07
CDCP2Q5VXM1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCP2Q5VXM1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.73■■□□□ 1.07
CDCP2Q5VXM1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.73■■□□□ 1.07
CDCP2Q5VXM1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCP2Q5VXM1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDCP2Q5VXM1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCP2Q5VXM1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 TSPY26P-201ENST00000476365 1326 ntBASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.72■■□□□ 1.07
CDCP2Q5VXM1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 DUX4L2-201ENST00000561772 1275 ntBASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 DUX4L6-201ENST00000626483 1275 ntBASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 DUX4L1-201ENST00000627662 1275 ntBASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 DUX4L8-201ENST00000629013 1275 ntBASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 DUX4L3-201ENST00000630187 1275 ntBASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 DUX4L7-201ENST00000630678 1275 ntBASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 DUX4L5-201ENST00000630834 1275 ntBASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCP2Q5VXM1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CDCP2Q5VXM1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 AC027612.3-201ENST00000413684 1047 ntBASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 SLC47A1P1-202ENST00000449666 945 ntBASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 AL137784.2-201ENST00000607332 1000 ntBASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCP2Q5VXM1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 AC123595.1-201ENST00000440769 1046 ntBASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 AL358852.1-201ENST00000623174 1268 ntBASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 AC092437.1-201ENST00000624794 1048 ntBASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 AC141586.4-201ENST00000624558 1573 ntBASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDCP2Q5VXM1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CDCP2Q5VXM1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.68■■□□□ 1.06
CDCP2Q5VXM1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
CDCP2Q5VXM1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.68■■□□□ 1.06
CDCP2Q5VXM1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.68■■□□□ 1.06
CDCP2Q5VXM1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.68■■□□□ 1.06
CDCP2Q5VXM1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.68■■□□□ 1.06
CDCP2Q5VXM1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCP2Q5VXM1 DUSP8P4-201ENST00000399538 1761 ntBASIC21.68■■□□□ 1.06
CDCP2Q5VXM1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCP2Q5VXM1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCP2Q5VXM1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.67■■□□□ 1.06
CDCP2Q5VXM1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDCP2Q5VXM1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
CDCP2Q5VXM1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.67■■□□□ 1.06
CDCP2Q5VXM1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
CDCP2Q5VXM1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CDCP2Q5VXM1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.67■■□□□ 1.06
CDCP2Q5VXM1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.67■■□□□ 1.06
CDCP2Q5VXM1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms