Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AC241585.3-202ENST00000628937 1088 ntBASIC23.04■■□□□ 1.28
FNDC3BQ53EP0 AC245100.8-202ENST00000629247 1058 ntBASIC23.04■■□□□ 1.28
FNDC3BQ53EP0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FNDC3BQ53EP0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
FNDC3BQ53EP0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FNDC3BQ53EP0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
FNDC3BQ53EP0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3BQ53EP0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3BQ53EP0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3BQ53EP0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3BQ53EP0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3BQ53EP0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.03■■□□□ 1.28
FNDC3BQ53EP0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.03■■□□□ 1.28
FNDC3BQ53EP0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3BQ53EP0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3BQ53EP0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
FNDC3BQ53EP0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.02■■□□□ 1.28
FNDC3BQ53EP0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNDC3BQ53EP0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNDC3BQ53EP0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNDC3BQ53EP0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.02■■□□□ 1.28
FNDC3BQ53EP0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.02■■□□□ 1.28
FNDC3BQ53EP0 MIR4767-201ENST00000582827 78 ntBASIC23.02■■□□□ 1.28
FNDC3BQ53EP0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.02■■□□□ 1.28
FNDC3BQ53EP0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNDC3BQ53EP0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
FNDC3BQ53EP0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.01■■□□□ 1.27
FNDC3BQ53EP0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
FNDC3BQ53EP0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FNDC3BQ53EP0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FNDC3BQ53EP0 AF213884.3-201ENST00000563833 479 ntBASIC23.01■■□□□ 1.27
FNDC3BQ53EP0 AC009086.3-201ENST00000623486 1008 ntBASIC23.01■■□□□ 1.27
FNDC3BQ53EP0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.01■■□□□ 1.27
FNDC3BQ53EP0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.01■■□□□ 1.27
FNDC3BQ53EP0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
FNDC3BQ53EP0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
FNDC3BQ53EP0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FNDC3BQ53EP0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
FNDC3BQ53EP0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23■■□□□ 1.27
FNDC3BQ53EP0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23■■□□□ 1.27
FNDC3BQ53EP0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23■■□□□ 1.27
FNDC3BQ53EP0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FNDC3BQ53EP0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FNDC3BQ53EP0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23■■□□□ 1.27
FNDC3BQ53EP0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
FNDC3BQ53EP0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23■■□□□ 1.27
FNDC3BQ53EP0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23■■□□□ 1.27
FNDC3BQ53EP0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FNDC3BQ53EP0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FNDC3BQ53EP0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23■■□□□ 1.27
FNDC3BQ53EP0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
FNDC3BQ53EP0 AC020928.2-201ENST00000588717 2197 ntBASIC22.99■■□□□ 1.27
FNDC3BQ53EP0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
FNDC3BQ53EP0 ZNRF2P3-201ENST00000424200 374 ntBASIC22.99■■□□□ 1.27
FNDC3BQ53EP0 AC006455.2-201ENST00000429931 906 ntBASIC22.99■■□□□ 1.27
FNDC3BQ53EP0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FNDC3BQ53EP0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.98■■□□□ 1.27
FNDC3BQ53EP0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FNDC3BQ53EP0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.98■■□□□ 1.27
FNDC3BQ53EP0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.98■■□□□ 1.27
FNDC3BQ53EP0 AL138724.1-201ENST00000606771 1088 ntBASIC22.98■■□□□ 1.27
FNDC3BQ53EP0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.98■■□□□ 1.27
FNDC3BQ53EP0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
FNDC3BQ53EP0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
FNDC3BQ53EP0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.98■■□□□ 1.27
FNDC3BQ53EP0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3BQ53EP0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.97■■□□□ 1.27
FNDC3BQ53EP0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3BQ53EP0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3BQ53EP0 AP001330.3-201ENST00000520123 633 ntBASIC22.97■■□□□ 1.27
FNDC3BQ53EP0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
FNDC3BQ53EP0 AC011298.3-201ENST00000615796 283 ntBASIC22.97■■□□□ 1.27
FNDC3BQ53EP0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
FNDC3BQ53EP0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.97■■□□□ 1.27
FNDC3BQ53EP0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3BQ53EP0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.97■■□□□ 1.27
FNDC3BQ53EP0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
FNDC3BQ53EP0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FNDC3BQ53EP0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
FNDC3BQ53EP0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
FNDC3BQ53EP0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.96■■□□□ 1.27
FNDC3BQ53EP0 AL136967.2-201ENST00000623968 743 ntBASIC22.96■■□□□ 1.27
FNDC3BQ53EP0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FNDC3BQ53EP0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
FNDC3BQ53EP0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FNDC3BQ53EP0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FNDC3BQ53EP0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
FNDC3BQ53EP0 MIR939-201ENST00000401314 82 ntBASIC22.95■■□□□ 1.26
FNDC3BQ53EP0 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.95■■□□□ 1.26
FNDC3BQ53EP0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
FNDC3BQ53EP0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.95■■□□□ 1.26
FNDC3BQ53EP0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FNDC3BQ53EP0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.95■■□□□ 1.26
FNDC3BQ53EP0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
FNDC3BQ53EP0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.94■■□□□ 1.26
FNDC3BQ53EP0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.94■■□□□ 1.26
FNDC3BQ53EP0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.94■■□□□ 1.26
FNDC3BQ53EP0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.94■■□□□ 1.26
FNDC3BQ53EP0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.94■■□□□ 1.26
FNDC3BQ53EP0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms