Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.04■□□□□ 0.96
RFX4Q33E94 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX4Q33E94 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX4Q33E94 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX4Q33E94 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.04■□□□□ 0.96
RFX4Q33E94 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RFX4Q33E94 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RFX4Q33E94 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX4Q33E94 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX4Q33E94 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX4Q33E94 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.03■□□□□ 0.96
RFX4Q33E94 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX4Q33E94 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX4Q33E94 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX4Q33E94 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX4Q33E94 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX4Q33E94 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX4Q33E94 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX4Q33E94 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX4Q33E94 AC009831.1-201ENST00000580420 1582 ntBASIC21.02■□□□□ 0.96
RFX4Q33E94 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFX4Q33E94 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.02■□□□□ 0.96
RFX4Q33E94 AC133552.2-201ENST00000619106 1032 ntBASIC21.02■□□□□ 0.96
RFX4Q33E94 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX4Q33E94 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX4Q33E94 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RFX4Q33E94 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RFX4Q33E94 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX4Q33E94 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX4Q33E94 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFX4Q33E94 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFX4Q33E94 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.01■□□□□ 0.95
RFX4Q33E94 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX4Q33E94 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX4Q33E94 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RFX4Q33E94 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX4Q33E94 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX4Q33E94 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX4Q33E94 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX4Q33E94 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RFX4Q33E94 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
RFX4Q33E94 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX4Q33E94 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.01■□□□□ 0.95
RFX4Q33E94 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX4Q33E94 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
RFX4Q33E94 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX4Q33E94 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21■□□□□ 0.95
RFX4Q33E94 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX4Q33E94 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX4Q33E94 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21■□□□□ 0.95
RFX4Q33E94 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RFX4Q33E94 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RFX4Q33E94 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21■□□□□ 0.95
RFX4Q33E94 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21■□□□□ 0.95
RFX4Q33E94 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
RFX4Q33E94 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX4Q33E94 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX4Q33E94 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX4Q33E94 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX4Q33E94 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX4Q33E94 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX4Q33E94 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFX4Q33E94 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
RFX4Q33E94 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX4Q33E94 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX4Q33E94 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX4Q33E94 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RFX4Q33E94 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFX4Q33E94 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RFX4Q33E94 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.97■□□□□ 0.95
RFX4Q33E94 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.97■□□□□ 0.95
RFX4Q33E94 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX4Q33E94 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RFX4Q33E94 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX4Q33E94 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFX4Q33E94 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
RFX4Q33E94 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RFX4Q33E94 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.97■□□□□ 0.95
RFX4Q33E94 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX4Q33E94 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFX4Q33E94 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.97■□□□□ 0.95
RFX4Q33E94 AC242852.2-201ENST00000615738 1807 ntBASIC20.97■□□□□ 0.95
RFX4Q33E94 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX4Q33E94 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX4Q33E94 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX4Q33E94 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFX4Q33E94 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.96■□□□□ 0.95
RFX4Q33E94 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX4Q33E94 ESRRAP2-201ENST00000418437 1549 ntBASIC20.96■□□□□ 0.95
RFX4Q33E94 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFX4Q33E94 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX4Q33E94 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX4Q33E94 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.96■□□□□ 0.95
RFX4Q33E94 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFX4Q33E94 RNF126P1-201ENST00000567452 1320 ntBASIC20.96■□□□□ 0.95
RFX4Q33E94 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX4Q33E94 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX4Q33E94 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFX4Q33E94 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RFX4Q33E94 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms