Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC093323.1-202ENST00000635031 2045 ntBASIC19.39■□□□□ 0.69
EFNB3Q15768 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EFNB3Q15768 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
EFNB3Q15768 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.38■□□□□ 0.69
EFNB3Q15768 PBX2P1-201ENST00000493219 1291 ntBASIC19.38■□□□□ 0.69
EFNB3Q15768 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.38■□□□□ 0.69
EFNB3Q15768 AL136162.1-201ENST00000607711 1078 ntBASIC19.38■□□□□ 0.69
EFNB3Q15768 AC005837.3-201ENST00000612163 286 ntBASIC19.38■□□□□ 0.69
EFNB3Q15768 C17orf82-201ENST00000623772 1530 ntBASIC19.38■□□□□ 0.69
EFNB3Q15768 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.37■□□□□ 0.69
EFNB3Q15768 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.37■□□□□ 0.69
EFNB3Q15768 AC135279.3-201ENST00000610945 1311 ntBASIC19.37■□□□□ 0.69
EFNB3Q15768 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFNB3Q15768 AC241377.3-202ENST00000626088 1088 ntBASIC19.37■□□□□ 0.69
EFNB3Q15768 AC241585.3-202ENST00000628937 1088 ntBASIC19.37■□□□□ 0.69
EFNB3Q15768 AC245100.8-202ENST00000629247 1058 ntBASIC19.37■□□□□ 0.69
EFNB3Q15768 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFNB3Q15768 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFNB3Q15768 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFNB3Q15768 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFNB3Q15768 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFNB3Q15768 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
EFNB3Q15768 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EFNB3Q15768 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFNB3Q15768 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.36■□□□□ 0.69
EFNB3Q15768 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.36■□□□□ 0.69
EFNB3Q15768 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
EFNB3Q15768 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.36■□□□□ 0.69
EFNB3Q15768 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
EFNB3Q15768 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.36■□□□□ 0.69
EFNB3Q15768 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFNB3Q15768 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
EFNB3Q15768 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
EFNB3Q15768 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.35■□□□□ 0.69
EFNB3Q15768 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.35■□□□□ 0.69
EFNB3Q15768 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
EFNB3Q15768 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EFNB3Q15768 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.35■□□□□ 0.69
EFNB3Q15768 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EFNB3Q15768 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.35■□□□□ 0.69
EFNB3Q15768 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
EFNB3Q15768 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EFNB3Q15768 SYT6-210ENST00000641643 1587 ntBASIC19.35■□□□□ 0.69
EFNB3Q15768 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EFNB3Q15768 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.34■□□□□ 0.69
EFNB3Q15768 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
EFNB3Q15768 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.34■□□□□ 0.69
EFNB3Q15768 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EFNB3Q15768 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EFNB3Q15768 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
EFNB3Q15768 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
EFNB3Q15768 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EFNB3Q15768 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EFNB3Q15768 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.34■□□□□ 0.69
EFNB3Q15768 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EFNB3Q15768 AC099791.2-201ENST00000605725 427 ntBASIC19.34■□□□□ 0.69
EFNB3Q15768 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
EFNB3Q15768 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
EFNB3Q15768 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
EFNB3Q15768 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
EFNB3Q15768 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
EFNB3Q15768 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
EFNB3Q15768 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
EFNB3Q15768 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.33■□□□□ 0.69
EFNB3Q15768 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.33■□□□□ 0.69
EFNB3Q15768 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.33■□□□□ 0.68
EFNB3Q15768 AC024257.2-201ENST00000549699 147 ntBASIC19.33■□□□□ 0.68
EFNB3Q15768 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.33■□□□□ 0.68
EFNB3Q15768 AL138724.1-201ENST00000606771 1088 ntBASIC19.33■□□□□ 0.68
EFNB3Q15768 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
EFNB3Q15768 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.33■□□□□ 0.68
EFNB3Q15768 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EFNB3Q15768 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
EFNB3Q15768 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EFNB3Q15768 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EFNB3Q15768 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EFNB3Q15768 EDA-201ENST00000338901 1233 ntBASIC19.32■□□□□ 0.68
EFNB3Q15768 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
EFNB3Q15768 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EFNB3Q15768 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EFNB3Q15768 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.32■□□□□ 0.68
EFNB3Q15768 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.32■□□□□ 0.68
EFNB3Q15768 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.32■□□□□ 0.68
EFNB3Q15768 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EFNB3Q15768 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.32■□□□□ 0.68
EFNB3Q15768 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EFNB3Q15768 AC141586.4-201ENST00000624558 1573 ntBASIC19.32■□□□□ 0.68
EFNB3Q15768 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.31■□□□□ 0.68
EFNB3Q15768 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
EFNB3Q15768 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EFNB3Q15768 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EFNB3Q15768 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.31■□□□□ 0.68
EFNB3Q15768 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
EFNB3Q15768 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.31■□□□□ 0.68
EFNB3Q15768 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.31■□□□□ 0.68
EFNB3Q15768 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EFNB3Q15768 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
EFNB3Q15768 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
EFNB3Q15768 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
EFNB3Q15768 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms