Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC139426.1-201ENST00000568218 2529 ntBASIC40.78■■■■■ 4.12
HMGXB3Q12766 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC40.78■■■■■ 4.12
HMGXB3Q12766 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC40.78■■■■■ 4.12
HMGXB3Q12766 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
HMGXB3Q12766 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC40.77■■■■■ 4.12
HMGXB3Q12766 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC40.77■■■■■ 4.12
HMGXB3Q12766 ST7-202ENST00000323984 2142 ntTSL 5 BASIC40.77■■■■■ 4.12
HMGXB3Q12766 ST7-207ENST00000393449 2127 ntTSL 5 BASIC40.77■■■■■ 4.12
HMGXB3Q12766 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
HMGXB3Q12766 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
HMGXB3Q12766 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
HMGXB3Q12766 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
HMGXB3Q12766 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC40.76■■■■■ 4.12
HMGXB3Q12766 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC40.76■■■■■ 4.12
HMGXB3Q12766 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
HMGXB3Q12766 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
HMGXB3Q12766 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC40.76■■■■■ 4.12
HMGXB3Q12766 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC40.75■■■■■ 4.11
HMGXB3Q12766 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC40.75■■■■■ 4.11
HMGXB3Q12766 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC40.75■■■■■ 4.11
HMGXB3Q12766 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC40.75■■■■■ 4.11
HMGXB3Q12766 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC40.75■■■■■ 4.11
HMGXB3Q12766 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC40.75■■■■■ 4.11
HMGXB3Q12766 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC40.75■■■■■ 4.11
HMGXB3Q12766 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC40.74■■■■■ 4.11
HMGXB3Q12766 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC40.74■■■■■ 4.11
HMGXB3Q12766 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC40.74■■■■■ 4.11
HMGXB3Q12766 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC40.74■■■■■ 4.11
HMGXB3Q12766 AC073111.5-205ENST00000641717 521 ntBASIC40.74■■■■■ 4.11
HMGXB3Q12766 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC40.73■■■■■ 4.11
HMGXB3Q12766 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC40.73■■■■■ 4.11
HMGXB3Q12766 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC40.73■■■■■ 4.11
HMGXB3Q12766 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC40.73■■■■■ 4.11
HMGXB3Q12766 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC40.72■■■■■ 4.11
HMGXB3Q12766 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC40.72■■■■■ 4.11
HMGXB3Q12766 AL022069.1-201ENST00000568025 1636 ntBASIC40.72■■■■■ 4.11
HMGXB3Q12766 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC40.72■■■■■ 4.11
HMGXB3Q12766 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC40.72■■■■■ 4.11
HMGXB3Q12766 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC40.72■■■■■ 4.11
HMGXB3Q12766 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
HMGXB3Q12766 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC40.72■■■■■ 4.11
HMGXB3Q12766 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC40.71■■■■■ 4.11
HMGXB3Q12766 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC40.71■■■■■ 4.11
HMGXB3Q12766 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC40.71■■■■■ 4.11
HMGXB3Q12766 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC40.71■■■■■ 4.11
HMGXB3Q12766 AC104771.1-201ENST00000603335 964 ntBASIC40.71■■■■■ 4.11
HMGXB3Q12766 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC40.71■■■■■ 4.11
HMGXB3Q12766 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
HMGXB3Q12766 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC40.7■■■■■ 4.11
HMGXB3Q12766 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC40.7■■■■■ 4.11
HMGXB3Q12766 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC40.7■■■■■ 4.11
HMGXB3Q12766 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC40.7■■■■■ 4.11
HMGXB3Q12766 CD37-213ENST00000598095 1598 ntTSL 2 BASIC40.7■■■■■ 4.11
HMGXB3Q12766 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC40.7■■■■■ 4.11
HMGXB3Q12766 LINC02228-203ENST00000641970 1355 ntBASIC40.69■■■■■ 4.1
HMGXB3Q12766 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC40.69■■■■■ 4.1
HMGXB3Q12766 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC40.69■■■■■ 4.1
HMGXB3Q12766 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.1
HMGXB3Q12766 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC40.68■■■■■ 4.1
HMGXB3Q12766 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC40.68■■■■■ 4.1
HMGXB3Q12766 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC40.68■■■■■ 4.1
HMGXB3Q12766 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC40.67■■■■■ 4.1
HMGXB3Q12766 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC40.67■■■■■ 4.1
HMGXB3Q12766 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC40.67■■■■■ 4.1
HMGXB3Q12766 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC40.67■■■■■ 4.1
HMGXB3Q12766 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC40.67■■■■■ 4.1
HMGXB3Q12766 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC40.67■■■■■ 4.1
HMGXB3Q12766 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC40.66■■■■■ 4.1
HMGXB3Q12766 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC40.66■■■■■ 4.1
HMGXB3Q12766 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC40.66■■■■■ 4.1
HMGXB3Q12766 ESRRAP2-201ENST00000418437 1549 ntBASIC40.66■■■■■ 4.1
HMGXB3Q12766 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC40.66■■■■■ 4.1
HMGXB3Q12766 CDCA4P2-201ENST00000441182 718 ntBASIC40.66■■■■■ 4.1
HMGXB3Q12766 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC40.66■■■■■ 4.1
HMGXB3Q12766 AC080038.1-201ENST00000611274 1154 ntBASIC40.66■■■■■ 4.1
HMGXB3Q12766 AC142086.6-201ENST00000621154 1765 ntBASIC40.66■■■■■ 4.1
HMGXB3Q12766 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC40.66■■■■■ 4.1
HMGXB3Q12766 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC40.66■■■■■ 4.1
HMGXB3Q12766 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC40.65■■■■■ 4.1
HMGXB3Q12766 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC40.65■■■■■ 4.1
HMGXB3Q12766 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC40.65■■■■■ 4.1
HMGXB3Q12766 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
HMGXB3Q12766 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
HMGXB3Q12766 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC40.64■■■■■ 4.1
HMGXB3Q12766 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC40.64■■■■■ 4.1
HMGXB3Q12766 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC40.64■■■■■ 4.1
HMGXB3Q12766 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
HMGXB3Q12766 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
HMGXB3Q12766 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
HMGXB3Q12766 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
HMGXB3Q12766 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC40.64■■■■■ 4.1
HMGXB3Q12766 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC40.63■■■■■ 4.1
HMGXB3Q12766 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC40.63■■■■■ 4.1
HMGXB3Q12766 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC40.63■■■■■ 4.1
HMGXB3Q12766 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC40.63■■■■■ 4.09
HMGXB3Q12766 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC40.63■■■■■ 4.09
HMGXB3Q12766 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC40.62■■■■■ 4.09
HMGXB3Q12766 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
HMGXB3Q12766 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC40.62■■■■■ 4.09
HMGXB3Q12766 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC40.62■■■■■ 4.09
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms