Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
COL16A1Q07092 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
COL16A1Q07092 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL16A1Q07092 MIR663A-201ENST00000385250 93 ntBASIC31.31■■■□□ 2.6
COL16A1Q07092 AC006970.2-201ENST00000450065 779 ntBASIC31.31■■■□□ 2.6
COL16A1Q07092 CD99P1-205ENST00000527459 561 ntBASIC31.31■■■□□ 2.6
COL16A1Q07092 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
COL16A1Q07092 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
COL16A1Q07092 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL16A1Q07092 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
COL16A1Q07092 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.3■■■□□ 2.6
COL16A1Q07092 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL16A1Q07092 HSCB-202ENST00000398941 955 ntTSL 2 BASIC31.3■■■□□ 2.6
COL16A1Q07092 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL16A1Q07092 NCF1B-203ENST00000435988 1254 ntBASIC31.3■■■□□ 2.6
COL16A1Q07092 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
COL16A1Q07092 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL16A1Q07092 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC31.3■■■□□ 2.6
COL16A1Q07092 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
COL16A1Q07092 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC31.29■■■□□ 2.6
COL16A1Q07092 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.29■■■□□ 2.6
COL16A1Q07092 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL16A1Q07092 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL16A1Q07092 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
COL16A1Q07092 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC31.29■■■□□ 2.6
COL16A1Q07092 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC31.29■■■□□ 2.6
COL16A1Q07092 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
COL16A1Q07092 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL16A1Q07092 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL16A1Q07092 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL16A1Q07092 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL16A1Q07092 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC31.28■■■□□ 2.6
COL16A1Q07092 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.28■■■□□ 2.6
COL16A1Q07092 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
COL16A1Q07092 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL16A1Q07092 NT5C3AP1-201ENST00000394500 1012 ntBASIC31.27■■■□□ 2.6
COL16A1Q07092 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.27■■■□□ 2.6
COL16A1Q07092 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC31.27■■■□□ 2.6
COL16A1Q07092 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
COL16A1Q07092 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
COL16A1Q07092 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
COL16A1Q07092 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
COL16A1Q07092 TSPY20P-201ENST00000450910 630 ntBASIC31.27■■■□□ 2.6
COL16A1Q07092 AP005435.1-201ENST00000529293 1178 ntBASIC31.27■■■□□ 2.6
COL16A1Q07092 DBI-210ENST00000542275 757 ntTSL 5 BASIC31.27■■■□□ 2.6
COL16A1Q07092 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC31.27■■■□□ 2.6
COL16A1Q07092 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC31.27■■■□□ 2.6
COL16A1Q07092 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
COL16A1Q07092 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC31.26■■■□□ 2.59
COL16A1Q07092 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
COL16A1Q07092 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
COL16A1Q07092 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.25■■■□□ 2.59
COL16A1Q07092 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
COL16A1Q07092 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
COL16A1Q07092 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC31.25■■■□□ 2.59
COL16A1Q07092 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC31.25■■■□□ 2.59
COL16A1Q07092 STX7-201ENST00000367937 1090 ntTSL 5 BASIC31.25■■■□□ 2.59
COL16A1Q07092 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC31.25■■■□□ 2.59
COL16A1Q07092 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC31.25■■■□□ 2.59
COL16A1Q07092 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC31.25■■■□□ 2.59
COL16A1Q07092 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
COL16A1Q07092 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC31.24■■■□□ 2.59
COL16A1Q07092 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC31.24■■■□□ 2.59
COL16A1Q07092 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC31.24■■■□□ 2.59
COL16A1Q07092 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
COL16A1Q07092 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
COL16A1Q07092 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
COL16A1Q07092 APTR-205ENST00000447009 902 ntTSL 2 BASIC31.24■■■□□ 2.59
COL16A1Q07092 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
COL16A1Q07092 WWOX-218ENST00000627394 894 ntTSL 5 BASIC31.24■■■□□ 2.59
COL16A1Q07092 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
COL16A1Q07092 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC31.23■■■□□ 2.59
COL16A1Q07092 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
COL16A1Q07092 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
COL16A1Q07092 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC31.23■■■□□ 2.59
COL16A1Q07092 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.22■■■□□ 2.59
COL16A1Q07092 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC31.22■■■□□ 2.59
COL16A1Q07092 GAMT-205ENST00000640762 751 ntTSL 5 BASIC31.22■■■□□ 2.59
COL16A1Q07092 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
COL16A1Q07092 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
COL16A1Q07092 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC31.22■■■□□ 2.59
COL16A1Q07092 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC31.22■■■□□ 2.59
COL16A1Q07092 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
COL16A1Q07092 AC096887.2-201ENST00000623443 1957 ntBASIC31.22■■■□□ 2.59
COL16A1Q07092 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL16A1Q07092 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
COL16A1Q07092 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL16A1Q07092 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
COL16A1Q07092 AC093827.2-201ENST00000512654 315 ntBASIC31.21■■■□□ 2.59
COL16A1Q07092 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.21■■■□□ 2.59
COL16A1Q07092 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL16A1Q07092 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL16A1Q07092 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.21■■■□□ 2.59
COL16A1Q07092 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
COL16A1Q07092 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC31.21■■■□□ 2.59
COL16A1Q07092 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
COL16A1Q07092 BID-214ENST00000617586 542 ntTSL 5 BASIC31.2■■■□□ 2.59
COL16A1Q07092 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.2■■■□□ 2.59
COL16A1Q07092 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
COL16A1Q07092 AC097639.1-201ENST00000565519 1891 ntBASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms