Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPXP78539 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPXP78539 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPXP78539 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRPXP78539 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SRPXP78539 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPXP78539 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPXP78539 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.67■□□□□ 0.58
SRPXP78539 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRPXP78539 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRPXP78539 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.66■□□□□ 0.58
SRPXP78539 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPXP78539 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
SRPXP78539 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRPXP78539 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.66■□□□□ 0.58
SRPXP78539 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SRPXP78539 AC007029.1-201ENST00000604183 313 ntBASIC18.66■□□□□ 0.58
SRPXP78539 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.66■□□□□ 0.58
SRPXP78539 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRPXP78539 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPXP78539 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
SRPXP78539 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRPXP78539 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SRPXP78539 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPXP78539 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRPXP78539 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SRPXP78539 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
SRPXP78539 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRPXP78539 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SRPXP78539 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SRPXP78539 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.65■□□□□ 0.58
SRPXP78539 AC016575.1-201ENST00000607026 382 ntBASIC18.65■□□□□ 0.58
SRPXP78539 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SRPXP78539 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRPXP78539 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SRPXP78539 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.65■□□□□ 0.58
SRPXP78539 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRPXP78539 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.65■□□□□ 0.58
SRPXP78539 ESRRAP2-201ENST00000418437 1549 ntBASIC18.64■□□□□ 0.58
SRPXP78539 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SRPXP78539 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
SRPXP78539 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SRPXP78539 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRPXP78539 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRPXP78539 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRPXP78539 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.64■□□□□ 0.57
SRPXP78539 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SRPXP78539 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SRPXP78539 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.64■□□□□ 0.57
SRPXP78539 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.64■□□□□ 0.57
SRPXP78539 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRPXP78539 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRPXP78539 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SRPXP78539 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
SRPXP78539 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.64■□□□□ 0.57
SRPXP78539 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRPXP78539 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SRPXP78539 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SRPXP78539 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SRPXP78539 RAP2CP1-202ENST00000605179 643 ntBASIC18.63■□□□□ 0.57
SRPXP78539 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.63■□□□□ 0.57
SRPXP78539 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SRPXP78539 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.62■□□□□ 0.57
SRPXP78539 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.62■□□□□ 0.57
SRPXP78539 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPXP78539 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.62■□□□□ 0.57
SRPXP78539 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPXP78539 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPXP78539 AC242852.2-201ENST00000615738 1807 ntBASIC18.62■□□□□ 0.57
SRPXP78539 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRPXP78539 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRPXP78539 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPXP78539 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPXP78539 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPXP78539 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRPXP78539 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.61■□□□□ 0.57
SRPXP78539 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.61■□□□□ 0.57
SRPXP78539 AL022069.1-201ENST00000568025 1636 ntBASIC18.61■□□□□ 0.57
SRPXP78539 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SRPXP78539 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 AC026202.3-201ENST00000600805 1127 ntBASIC18.61■□□□□ 0.57
SRPXP78539 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRPXP78539 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.6■□□□□ 0.57
SRPXP78539 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.6■□□□□ 0.57
SRPXP78539 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRPXP78539 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.6■□□□□ 0.57
SRPXP78539 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRPXP78539 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRPXP78539 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms