Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NKX6-1P78426 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.87■□□□□ 0.77
NKX6-1P78426 MIR6722-201ENST00000617286 78 ntBASIC19.87■□□□□ 0.77
NKX6-1P78426 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.87■□□□□ 0.77
NKX6-1P78426 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.87■□□□□ 0.77
NKX6-1P78426 HLA-L-211ENST00000482052 1765 ntBASIC19.87■□□□□ 0.77
NKX6-1P78426 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.87■□□□□ 0.77
NKX6-1P78426 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NKX6-1P78426 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.86■□□□□ 0.77
NKX6-1P78426 SUDS3P1-201ENST00000505831 966 ntBASIC19.86■□□□□ 0.77
NKX6-1P78426 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.86■□□□□ 0.77
NKX6-1P78426 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.86■□□□□ 0.77
NKX6-1P78426 AC138932.3-201ENST00000567634 1902 ntBASIC19.86■□□□□ 0.77
NKX6-1P78426 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX6-1P78426 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX6-1P78426 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.85■□□□□ 0.77
NKX6-1P78426 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX6-1P78426 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX6-1P78426 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX6-1P78426 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX6-1P78426 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NKX6-1P78426 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.84■□□□□ 0.77
NKX6-1P78426 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.84■□□□□ 0.77
NKX6-1P78426 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX6-1P78426 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX6-1P78426 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX6-1P78426 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX6-1P78426 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.84■□□□□ 0.77
NKX6-1P78426 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.84■□□□□ 0.77
NKX6-1P78426 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX6-1P78426 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NKX6-1P78426 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX6-1P78426 EDA-201ENST00000338901 1233 ntBASIC19.83■□□□□ 0.77
NKX6-1P78426 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.83■□□□□ 0.77
NKX6-1P78426 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.83■□□□□ 0.77
NKX6-1P78426 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NKX6-1P78426 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.83■□□□□ 0.77
NKX6-1P78426 AL031432.3-201ENST00000607698 485 ntBASIC19.83■□□□□ 0.77
NKX6-1P78426 AL355001.2-201ENST00000620617 1191 ntBASIC19.83■□□□□ 0.77
NKX6-1P78426 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NKX6-1P78426 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.83■□□□□ 0.76
NKX6-1P78426 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX6-1P78426 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX6-1P78426 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.82■□□□□ 0.76
NKX6-1P78426 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX6-1P78426 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX6-1P78426 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NKX6-1P78426 SRD5A1P1-201ENST00000442297 786 ntBASIC19.82■□□□□ 0.76
NKX6-1P78426 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
NKX6-1P78426 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.82■□□□□ 0.76
NKX6-1P78426 AL022069.1-201ENST00000568025 1636 ntBASIC19.82■□□□□ 0.76
NKX6-1P78426 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NKX6-1P78426 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.82■□□□□ 0.76
NKX6-1P78426 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NKX6-1P78426 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.81■□□□□ 0.76
NKX6-1P78426 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX6-1P78426 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX6-1P78426 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX6-1P78426 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NKX6-1P78426 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.8■□□□□ 0.76
NKX6-1P78426 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.8■□□□□ 0.76
NKX6-1P78426 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX6-1P78426 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
NKX6-1P78426 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.8■□□□□ 0.76
NKX6-1P78426 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX6-1P78426 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.8■□□□□ 0.76
NKX6-1P78426 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NKX6-1P78426 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX6-1P78426 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NKX6-1P78426 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NKX6-1P78426 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX6-1P78426 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
NKX6-1P78426 AL161729.1-201ENST00000604104 1402 ntBASIC19.79■□□□□ 0.76
NKX6-1P78426 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX6-1P78426 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NKX6-1P78426 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NKX6-1P78426 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX6-1P78426 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.79■□□□□ 0.76
NKX6-1P78426 AC024257.2-201ENST00000549699 147 ntBASIC19.79■□□□□ 0.76
NKX6-1P78426 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NKX6-1P78426 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NKX6-1P78426 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX6-1P78426 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NKX6-1P78426 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX6-1P78426 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.79■□□□□ 0.76
NKX6-1P78426 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NKX6-1P78426 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-1P78426 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-1P78426 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-1P78426 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-1P78426 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-1P78426 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.78■□□□□ 0.76
NKX6-1P78426 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.78■□□□□ 0.76
NKX6-1P78426 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.78■□□□□ 0.76
NKX6-1P78426 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NKX6-1P78426 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-1P78426 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-1P78426 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX6-1P78426 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NKX6-1P78426 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms