Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.84■□□□□ 0.77
HIST1H3AP68431 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIST1H3AP68431 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HIST1H3AP68431 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIST1H3AP68431 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIST1H3AP68431 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HIST1H3AP68431 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
HIST1H3AP68431 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.83■□□□□ 0.77
HIST1H3AP68431 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HIST1H3AP68431 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HIST1H3AP68431 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HIST1H3AP68431 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
HIST1H3AP68431 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H3AP68431 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HIST1H3AP68431 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.82■□□□□ 0.76
HIST1H3AP68431 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H3AP68431 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H3AP68431 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H3AP68431 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H3AP68431 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HIST1H3AP68431 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.82■□□□□ 0.76
HIST1H3AP68431 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H3AP68431 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.82■□□□□ 0.76
HIST1H3AP68431 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.82■□□□□ 0.76
HIST1H3AP68431 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H3AP68431 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H3AP68431 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.82■□□□□ 0.76
HIST1H3AP68431 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H3AP68431 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H3AP68431 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HIST1H3AP68431 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST1H3AP68431 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST1H3AP68431 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.81■□□□□ 0.76
HIST1H3AP68431 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.81■□□□□ 0.76
HIST1H3AP68431 Z92544.1-202ENST00000571933 1220 ntBASIC19.81■□□□□ 0.76
HIST1H3AP68431 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.81■□□□□ 0.76
HIST1H3AP68431 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HIST1H3AP68431 MIR6722-201ENST00000617286 78 ntBASIC19.81■□□□□ 0.76
HIST1H3AP68431 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.81■□□□□ 0.76
HIST1H3AP68431 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HIST1H3AP68431 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST1H3AP68431 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST1H3AP68431 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H3AP68431 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.8■□□□□ 0.76
HIST1H3AP68431 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H3AP68431 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HIST1H3AP68431 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
HIST1H3AP68431 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H3AP68431 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.8■□□□□ 0.76
HIST1H3AP68431 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.8■□□□□ 0.76
HIST1H3AP68431 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HIST1H3AP68431 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H3AP68431 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.8■□□□□ 0.76
HIST1H3AP68431 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H3AP68431 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.8■□□□□ 0.76
HIST1H3AP68431 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.8■□□□□ 0.76
HIST1H3AP68431 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H3AP68431 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIST1H3AP68431 DUSP8P3-201ENST00000399571 1760 ntBASIC19.8■□□□□ 0.76
HIST1H3AP68431 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.8■□□□□ 0.76
HIST1H3AP68431 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H3AP68431 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H3AP68431 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H3AP68431 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H3AP68431 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.79■□□□□ 0.76
HIST1H3AP68431 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H3AP68431 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.79■□□□□ 0.76
HIST1H3AP68431 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.79■□□□□ 0.76
HIST1H3AP68431 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H3AP68431 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H3AP68431 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HIST1H3AP68431 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H3AP68431 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.79■□□□□ 0.76
HIST1H3AP68431 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.79■□□□□ 0.76
HIST1H3AP68431 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HIST1H3AP68431 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H3AP68431 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.79■□□□□ 0.76
HIST1H3AP68431 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
HIST1H3AP68431 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIST1H3AP68431 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HIST1H3AP68431 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST1H3AP68431 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HIST1H3AP68431 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.78■□□□□ 0.76
HIST1H3AP68431 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST1H3AP68431 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HIST1H3AP68431 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST1H3AP68431 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST1H3AP68431 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.78■□□□□ 0.76
HIST1H3AP68431 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HIST1H3AP68431 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.78■□□□□ 0.76
HIST1H3AP68431 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
HIST1H3AP68431 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIST1H3AP68431 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIST1H3AP68431 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HIST1H3AP68431 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.77■□□□□ 0.76
HIST1H3AP68431 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIST1H3AP68431 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HIST1H3AP68431 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.77■□□□□ 0.76
HIST1H3AP68431 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.77■□□□□ 0.76
HIST1H3AP68431 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms