Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CXCR4P61073 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CXCR4P61073 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CXCR4P61073 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CXCR4P61073 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CXCR4P61073 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.69■□□□□ 0.9
CXCR4P61073 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.69■□□□□ 0.9
CXCR4P61073 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.69■□□□□ 0.9
CXCR4P61073 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CXCR4P61073 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCR4P61073 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CXCR4P61073 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CXCR4P61073 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CXCR4P61073 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CXCR4P61073 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.68■□□□□ 0.9
CXCR4P61073 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCR4P61073 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CXCR4P61073 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.68■□□□□ 0.9
CXCR4P61073 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.68■□□□□ 0.9
CXCR4P61073 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCR4P61073 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCR4P61073 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CXCR4P61073 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CXCR4P61073 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CXCR4P61073 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CXCR4P61073 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CXCR4P61073 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CXCR4P61073 AC007029.1-201ENST00000604183 313 ntBASIC20.67■□□□□ 0.9
CXCR4P61073 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.67■□□□□ 0.9
CXCR4P61073 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.67■□□□□ 0.9
CXCR4P61073 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.67■□□□□ 0.9
CXCR4P61073 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CXCR4P61073 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CXCR4P61073 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCR4P61073 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCR4P61073 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.66■□□□□ 0.9
CXCR4P61073 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCR4P61073 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCR4P61073 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CXCR4P61073 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCR4P61073 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCR4P61073 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.65■□□□□ 0.9
CXCR4P61073 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCR4P61073 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
CXCR4P61073 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCR4P61073 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CXCR4P61073 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.65■□□□□ 0.9
CXCR4P61073 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
CXCR4P61073 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CXCR4P61073 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CXCR4P61073 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.64■□□□□ 0.9
CXCR4P61073 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.64■□□□□ 0.9
CXCR4P61073 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CXCR4P61073 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CXCR4P61073 KRT18P10-201ENST00000388836 1287 ntBASIC20.64■□□□□ 0.89
CXCR4P61073 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CXCR4P61073 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CXCR4P61073 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.64■□□□□ 0.89
CXCR4P61073 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CXCR4P61073 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CXCR4P61073 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CXCR4P61073 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CXCR4P61073 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CXCR4P61073 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCR4P61073 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CXCR4P61073 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCR4P61073 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCR4P61073 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCR4P61073 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CXCR4P61073 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CXCR4P61073 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CXCR4P61073 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
CXCR4P61073 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.62■□□□□ 0.89
CXCR4P61073 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.62■□□□□ 0.89
CXCR4P61073 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.62■□□□□ 0.89
CXCR4P61073 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.62■□□□□ 0.89
CXCR4P61073 RAP2CP1-202ENST00000605179 643 ntBASIC20.62■□□□□ 0.89
CXCR4P61073 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CXCR4P61073 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CXCR4P61073 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.62■□□□□ 0.89
CXCR4P61073 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.62■□□□□ 0.89
CXCR4P61073 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.62■□□□□ 0.89
CXCR4P61073 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.62■□□□□ 0.89
CXCR4P61073 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCR4P61073 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCR4P61073 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCR4P61073 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCR4P61073 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCR4P61073 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCR4P61073 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.61■□□□□ 0.89
CXCR4P61073 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCR4P61073 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.61■□□□□ 0.89
CXCR4P61073 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.61■□□□□ 0.89
CXCR4P61073 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.61■□□□□ 0.89
CXCR4P61073 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCR4P61073 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCR4P61073 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCR4P61073 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.6■□□□□ 0.89
CXCR4P61073 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCR4P61073 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms