Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EPHA4P54764 SUDS3P1-201ENST00000505831 966 ntBASIC21.91■■□□□ 1.1
EPHA4P54764 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EPHA4P54764 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
EPHA4P54764 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.91■■□□□ 1.1
EPHA4P54764 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
EPHA4P54764 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
EPHA4P54764 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EPHA4P54764 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EPHA4P54764 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.9■■□□□ 1.1
EPHA4P54764 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
EPHA4P54764 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.9■■□□□ 1.1
EPHA4P54764 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EPHA4P54764 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.9■■□□□ 1.1
EPHA4P54764 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EPHA4P54764 SERBP1P1-201ENST00000396021 1160 ntBASIC21.9■■□□□ 1.1
EPHA4P54764 MIR935-201ENST00000401179 91 ntBASIC21.9■■□□□ 1.1
EPHA4P54764 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
EPHA4P54764 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.9■■□□□ 1.1
EPHA4P54764 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
EPHA4P54764 AC011298.3-201ENST00000615796 283 ntBASIC21.9■■□□□ 1.1
EPHA4P54764 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.9■■□□□ 1.1
EPHA4P54764 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
EPHA4P54764 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
EPHA4P54764 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
EPHA4P54764 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EPHA4P54764 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
EPHA4P54764 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
EPHA4P54764 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.89■■□□□ 1.1
EPHA4P54764 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
EPHA4P54764 AC138932.3-201ENST00000567634 1902 ntBASIC21.89■■□□□ 1.09
EPHA4P54764 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EPHA4P54764 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.89■■□□□ 1.09
EPHA4P54764 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.89■■□□□ 1.09
EPHA4P54764 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.89■■□□□ 1.09
EPHA4P54764 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EPHA4P54764 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EPHA4P54764 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EPHA4P54764 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
EPHA4P54764 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
EPHA4P54764 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
EPHA4P54764 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
EPHA4P54764 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.88■■□□□ 1.09
EPHA4P54764 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EPHA4P54764 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EPHA4P54764 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.88■■□□□ 1.09
EPHA4P54764 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EPHA4P54764 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EPHA4P54764 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
EPHA4P54764 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EPHA4P54764 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EPHA4P54764 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.87■■□□□ 1.09
EPHA4P54764 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.87■■□□□ 1.09
EPHA4P54764 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.87■■□□□ 1.09
EPHA4P54764 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
EPHA4P54764 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.87■■□□□ 1.09
EPHA4P54764 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.87■■□□□ 1.09
EPHA4P54764 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
EPHA4P54764 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EPHA4P54764 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.86■■□□□ 1.09
EPHA4P54764 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
EPHA4P54764 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.86■■□□□ 1.09
EPHA4P54764 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EPHA4P54764 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
EPHA4P54764 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EPHA4P54764 AC009086.3-201ENST00000623486 1008 ntBASIC21.86■■□□□ 1.09
EPHA4P54764 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
EPHA4P54764 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
EPHA4P54764 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.86■■□□□ 1.09
EPHA4P54764 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.85■■□□□ 1.09
EPHA4P54764 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
EPHA4P54764 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
EPHA4P54764 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
EPHA4P54764 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
EPHA4P54764 MIR4767-201ENST00000582827 78 ntBASIC21.85■■□□□ 1.09
EPHA4P54764 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.85■■□□□ 1.09
EPHA4P54764 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
EPHA4P54764 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
EPHA4P54764 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EPHA4P54764 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EPHA4P54764 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.84■■□□□ 1.09
EPHA4P54764 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.84■■□□□ 1.09
EPHA4P54764 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.84■■□□□ 1.09
EPHA4P54764 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.84■■□□□ 1.09
EPHA4P54764 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.84■■□□□ 1.09
EPHA4P54764 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
EPHA4P54764 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
EPHA4P54764 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EPHA4P54764 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EPHA4P54764 MIR939-201ENST00000401314 82 ntBASIC21.83■■□□□ 1.09
EPHA4P54764 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
EPHA4P54764 AP001330.3-201ENST00000520123 633 ntBASIC21.83■■□□□ 1.09
EPHA4P54764 AF213884.3-201ENST00000563833 479 ntBASIC21.83■■□□□ 1.09
EPHA4P54764 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.83■■□□□ 1.09
EPHA4P54764 AL136967.2-201ENST00000623968 743 ntBASIC21.83■■□□□ 1.09
EPHA4P54764 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
EPHA4P54764 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
EPHA4P54764 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EPHA4P54764 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EPHA4P54764 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms