Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.02■■□□□ 1.12
PDX1P52945 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.02■■□□□ 1.12
PDX1P52945 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDX1P52945 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDX1P52945 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PDX1P52945 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDX1P52945 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.01■■□□□ 1.11
PDX1P52945 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDX1P52945 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDX1P52945 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.01■■□□□ 1.11
PDX1P52945 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.01■■□□□ 1.11
PDX1P52945 AC092171.4-201ENST00000609130 632 ntBASIC22.01■■□□□ 1.11
PDX1P52945 MIR6089-201ENST00000616698 64 ntBASIC22.01■■□□□ 1.11
PDX1P52945 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.01■■□□□ 1.11
PDX1P52945 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDX1P52945 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDX1P52945 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDX1P52945 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDX1P52945 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDX1P52945 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PDX1P52945 AC009102.2-201ENST00000606772 1639 ntBASIC22■■□□□ 1.11
PDX1P52945 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22■■□□□ 1.11
PDX1P52945 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22■■□□□ 1.11
PDX1P52945 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDX1P52945 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22■■□□□ 1.11
PDX1P52945 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PDX1P52945 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22■■□□□ 1.11
PDX1P52945 AC099791.2-201ENST00000605725 427 ntBASIC22■■□□□ 1.11
PDX1P52945 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PDX1P52945 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PDX1P52945 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDX1P52945 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PDX1P52945 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PDX1P52945 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDX1P52945 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDX1P52945 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PDX1P52945 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDX1P52945 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.99■■□□□ 1.11
PDX1P52945 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PDX1P52945 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.99■■□□□ 1.11
PDX1P52945 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.99■■□□□ 1.11
PDX1P52945 AC104564.3-201ENST00000582367 638 ntBASIC21.99■■□□□ 1.11
PDX1P52945 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.99■■□□□ 1.11
PDX1P52945 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDX1P52945 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDX1P52945 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDX1P52945 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PDX1P52945 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDX1P52945 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDX1P52945 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PDX1P52945 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PDX1P52945 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDX1P52945 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.98■■□□□ 1.11
PDX1P52945 CA15P2-201ENST00000611168 834 ntBASIC21.98■■□□□ 1.11
PDX1P52945 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDX1P52945 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PDX1P52945 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDX1P52945 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.98■■□□□ 1.11
PDX1P52945 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDX1P52945 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.98■■□□□ 1.11
PDX1P52945 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.98■■□□□ 1.11
PDX1P52945 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDX1P52945 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDX1P52945 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.97■■□□□ 1.11
PDX1P52945 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.97■■□□□ 1.11
PDX1P52945 MIR6821-201ENST00000617625 74 ntBASIC21.97■■□□□ 1.11
PDX1P52945 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDX1P52945 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.97■■□□□ 1.11
PDX1P52945 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDX1P52945 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.96■■□□□ 1.11
PDX1P52945 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
PDX1P52945 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDX1P52945 AC011298.3-201ENST00000615796 283 ntBASIC21.96■■□□□ 1.11
PDX1P52945 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDX1P52945 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDX1P52945 RASA4CP-201ENST00000424092 1398 ntBASIC21.96■■□□□ 1.11
PDX1P52945 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.95■■□□□ 1.11
PDX1P52945 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDX1P52945 AC027682.1-201ENST00000562846 899 ntBASIC21.95■■□□□ 1.1
PDX1P52945 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.95■■□□□ 1.1
PDX1P52945 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PDX1P52945 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDX1P52945 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDX1P52945 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDX1P52945 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDX1P52945 AL138724.1-201ENST00000606771 1088 ntBASIC21.94■■□□□ 1.1
PDX1P52945 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDX1P52945 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDX1P52945 C17orf82-201ENST00000623772 1530 ntBASIC21.94■■□□□ 1.1
PDX1P52945 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.94■■□□□ 1.1
PDX1P52945 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDX1P52945 AC097381.1-201ENST00000429019 1296 ntBASIC21.93■■□□□ 1.1
PDX1P52945 AL139125.2-201ENST00000623134 1869 ntBASIC21.93■■□□□ 1.1
PDX1P52945 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDX1P52945 AC093323.1-202ENST00000635031 2045 ntBASIC21.92■■□□□ 1.1
PDX1P52945 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDX1P52945 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDX1P52945 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDX1P52945 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDX1P52945 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms