Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.33■■□□□ 1.33
NEK3P51956 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.33■■□□□ 1.33
NEK3P51956 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.33■■□□□ 1.33
NEK3P51956 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NEK3P51956 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
NEK3P51956 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
NEK3P51956 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.32■■□□□ 1.32
NEK3P51956 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.32■■□□□ 1.32
NEK3P51956 SNX5-217ENST00000606557 1087 ntBASIC23.32■■□□□ 1.32
NEK3P51956 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NEK3P51956 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.32■■□□□ 1.32
NEK3P51956 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK3P51956 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK3P51956 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.31■■□□□ 1.32
NEK3P51956 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NEK3P51956 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK3P51956 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.31■■□□□ 1.32
NEK3P51956 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.31■■□□□ 1.32
NEK3P51956 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NEK3P51956 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK3P51956 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NEK3P51956 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.31■■□□□ 1.32
NEK3P51956 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NEK3P51956 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.3■■□□□ 1.32
NEK3P51956 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NEK3P51956 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NEK3P51956 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK3P51956 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK3P51956 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK3P51956 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
NEK3P51956 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK3P51956 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
NEK3P51956 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
NEK3P51956 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NEK3P51956 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
NEK3P51956 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NEK3P51956 AC079834.2-201ENST00000609776 1949 ntBASIC23.28■■□□□ 1.32
NEK3P51956 HLA-L-211ENST00000482052 1765 ntBASIC23.28■■□□□ 1.32
NEK3P51956 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.28■■□□□ 1.32
NEK3P51956 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NEK3P51956 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEK3P51956 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.28■■□□□ 1.32
NEK3P51956 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.28■■□□□ 1.32
NEK3P51956 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEK3P51956 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEK3P51956 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEK3P51956 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
NEK3P51956 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.27■■□□□ 1.32
NEK3P51956 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NEK3P51956 AL117332.1-201ENST00000622628 974 ntBASIC23.27■■□□□ 1.32
NEK3P51956 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.27■■□□□ 1.32
NEK3P51956 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEK3P51956 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
NEK3P51956 AC008406.3-201ENST00000620001 1374 ntBASIC23.27■■□□□ 1.31
NEK3P51956 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
NEK3P51956 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NEK3P51956 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NEK3P51956 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NEK3P51956 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
NEK3P51956 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.26■■□□□ 1.31
NEK3P51956 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.26■■□□□ 1.31
NEK3P51956 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NEK3P51956 MIR6722-201ENST00000617286 78 ntBASIC23.26■■□□□ 1.31
NEK3P51956 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NEK3P51956 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NEK3P51956 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
NEK3P51956 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEK3P51956 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
NEK3P51956 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NEK3P51956 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.25■■□□□ 1.31
NEK3P51956 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.25■■□□□ 1.31
NEK3P51956 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEK3P51956 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEK3P51956 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.25■■□□□ 1.31
NEK3P51956 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NEK3P51956 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.24■■□□□ 1.31
NEK3P51956 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.24■■□□□ 1.31
NEK3P51956 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.24■■□□□ 1.31
NEK3P51956 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.24■■□□□ 1.31
NEK3P51956 MIR3621-201ENST00000580529 85 ntBASIC23.24■■□□□ 1.31
NEK3P51956 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.24■■□□□ 1.31
NEK3P51956 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NEK3P51956 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.24■■□□□ 1.31
NEK3P51956 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.24■■□□□ 1.31
NEK3P51956 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NEK3P51956 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NEK3P51956 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NEK3P51956 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.23■■□□□ 1.31
NEK3P51956 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.23■■□□□ 1.31
NEK3P51956 AC004448.1-201ENST00000458332 883 ntBASIC23.23■■□□□ 1.31
NEK3P51956 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.23■■□□□ 1.31
NEK3P51956 AL356740.2-201ENST00000601559 647 ntBASIC23.23■■□□□ 1.31
NEK3P51956 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.23■■□□□ 1.31
NEK3P51956 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.23■■□□□ 1.31
NEK3P51956 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.23■■□□□ 1.31
NEK3P51956 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NEK3P51956 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK3P51956 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NEK3P51956 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK3P51956 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms