Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.41■■□□□ 1.66
CPT1AP50416 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CPT1AP50416 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.41■■□□□ 1.66
CPT1AP50416 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.41■■□□□ 1.66
CPT1AP50416 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CPT1AP50416 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CPT1AP50416 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CPT1AP50416 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
CPT1AP50416 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.4■■□□□ 1.66
CPT1AP50416 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CPT1AP50416 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.4■■□□□ 1.66
CPT1AP50416 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CPT1AP50416 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CPT1AP50416 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CPT1AP50416 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.39■■□□□ 1.66
CPT1AP50416 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
CPT1AP50416 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CPT1AP50416 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.39■■□□□ 1.65
CPT1AP50416 ALDH1A3-203ENST00000557963 1670 ntBASIC25.39■■□□□ 1.65
CPT1AP50416 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
CPT1AP50416 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.38■■□□□ 1.65
CPT1AP50416 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.38■■□□□ 1.65
CPT1AP50416 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.38■■□□□ 1.65
CPT1AP50416 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
CPT1AP50416 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CPT1AP50416 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CPT1AP50416 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CPT1AP50416 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CPT1AP50416 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.37■■□□□ 1.65
CPT1AP50416 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CPT1AP50416 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CPT1AP50416 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CPT1AP50416 AL162430.1-201ENST00000480705 870 ntBASIC25.36■■□□□ 1.65
CPT1AP50416 pRNA.6-201ENST00000610482 90 ntBASIC25.36■■□□□ 1.65
CPT1AP50416 pRNA.5-201ENST00000612139 90 ntBASIC25.36■■□□□ 1.65
CPT1AP50416 pRNA.11-201ENST00000618423 90 ntBASIC25.36■■□□□ 1.65
CPT1AP50416 pRNA.13-201ENST00000619112 90 ntBASIC25.36■■□□□ 1.65
CPT1AP50416 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
CPT1AP50416 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.35■■□□□ 1.65
CPT1AP50416 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CPT1AP50416 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPT1AP50416 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CPT1AP50416 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPT1AP50416 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.35■■□□□ 1.65
CPT1AP50416 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.35■■□□□ 1.65
CPT1AP50416 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.35■■□□□ 1.65
CPT1AP50416 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CPT1AP50416 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPT1AP50416 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.35■■□□□ 1.65
CPT1AP50416 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CPT1AP50416 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPT1AP50416 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPT1AP50416 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPT1AP50416 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPT1AP50416 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.34■■□□□ 1.65
CPT1AP50416 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPT1AP50416 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPT1AP50416 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.33■■□□□ 1.65
CPT1AP50416 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.33■■□□□ 1.65
CPT1AP50416 AC141586.4-201ENST00000624558 1573 ntBASIC25.32■■□□□ 1.64
CPT1AP50416 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.32■■□□□ 1.64
CPT1AP50416 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.32■■□□□ 1.64
CPT1AP50416 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.32■■□□□ 1.64
CPT1AP50416 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
CPT1AP50416 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.32■■□□□ 1.64
CPT1AP50416 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CPT1AP50416 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CPT1AP50416 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPT1AP50416 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPT1AP50416 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.31■■□□□ 1.64
CPT1AP50416 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CPT1AP50416 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.31■■□□□ 1.64
CPT1AP50416 AC126544.1-201ENST00000580842 1059 ntBASIC25.31■■□□□ 1.64
CPT1AP50416 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CPT1AP50416 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CPT1AP50416 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.31■■□□□ 1.64
CPT1AP50416 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.31■■□□□ 1.64
CPT1AP50416 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CPT1AP50416 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.3■■□□□ 1.64
CPT1AP50416 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.3■■□□□ 1.64
CPT1AP50416 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.3■■□□□ 1.64
CPT1AP50416 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.29■■□□□ 1.64
CPT1AP50416 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CPT1AP50416 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CPT1AP50416 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CPT1AP50416 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CPT1AP50416 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.29■■□□□ 1.64
CPT1AP50416 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.29■■□□□ 1.64
CPT1AP50416 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CPT1AP50416 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
CPT1AP50416 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CPT1AP50416 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.28■■□□□ 1.64
CPT1AP50416 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CPT1AP50416 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CPT1AP50416 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.28■■□□□ 1.64
CPT1AP50416 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.28■■□□□ 1.64
CPT1AP50416 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CPT1AP50416 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.28■■□□□ 1.64
CPT1AP50416 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.28■■□□□ 1.64
CPT1AP50416 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms