Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRIM2P49643 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
PRIM2P49643 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.47■■□□□ 1.03
PRIM2P49643 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRIM2P49643 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.47■■□□□ 1.03
PRIM2P49643 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.47■■□□□ 1.03
PRIM2P49643 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PRIM2P49643 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRIM2P49643 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRIM2P49643 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.46■■□□□ 1.03
PRIM2P49643 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRIM2P49643 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PRIM2P49643 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRIM2P49643 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRIM2P49643 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.46■■□□□ 1.03
PRIM2P49643 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRIM2P49643 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PRIM2P49643 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.46■■□□□ 1.03
PRIM2P49643 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
PRIM2P49643 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRIM2P49643 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PRIM2P49643 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRIM2P49643 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRIM2P49643 YBX1P4-201ENST00000392794 808 ntBASIC21.45■■□□□ 1.02
PRIM2P49643 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.45■■□□□ 1.02
PRIM2P49643 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRIM2P49643 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.45■■□□□ 1.02
PRIM2P49643 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRIM2P49643 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PRIM2P49643 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.45■■□□□ 1.02
PRIM2P49643 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRIM2P49643 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRIM2P49643 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PRIM2P49643 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.45■■□□□ 1.02
PRIM2P49643 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PRIM2P49643 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRIM2P49643 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRIM2P49643 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRIM2P49643 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.44■■□□□ 1.02
PRIM2P49643 MIR4281-201ENST00000580852 62 ntBASIC21.44■■□□□ 1.02
PRIM2P49643 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.44■■□□□ 1.02
PRIM2P49643 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.44■■□□□ 1.02
PRIM2P49643 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRIM2P49643 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PRIM2P49643 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PRIM2P49643 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.44■■□□□ 1.02
PRIM2P49643 C9orf163-202ENST00000624034 2573 ntBASIC21.43■■□□□ 1.02
PRIM2P49643 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.43■■□□□ 1.02
PRIM2P49643 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRIM2P49643 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
PRIM2P49643 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRIM2P49643 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PRIM2P49643 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRIM2P49643 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRIM2P49643 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRIM2P49643 KRT8P33-201ENST00000508125 1423 ntBASIC21.42■■□□□ 1.02
PRIM2P49643 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PRIM2P49643 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRIM2P49643 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PRIM2P49643 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PRIM2P49643 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRIM2P49643 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.41■■□□□ 1.02
PRIM2P49643 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRIM2P49643 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PRIM2P49643 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRIM2P49643 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRIM2P49643 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.41■■□□□ 1.02
PRIM2P49643 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PRIM2P49643 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.41■■□□□ 1.02
PRIM2P49643 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRIM2P49643 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.4■■□□□ 1.02
PRIM2P49643 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PRIM2P49643 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRIM2P49643 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRIM2P49643 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.4■■□□□ 1.02
PRIM2P49643 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.4■■□□□ 1.02
PRIM2P49643 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRIM2P49643 AC103834.1-201ENST00000520383 144 ntBASIC21.4■■□□□ 1.02
PRIM2P49643 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRIM2P49643 ANOS2P-203ENST00000472227 1816 ntBASIC21.4■■□□□ 1.02
PRIM2P49643 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PRIM2P49643 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PRIM2P49643 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRIM2P49643 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.4■■□□□ 1.02
PRIM2P49643 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRIM2P49643 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PRIM2P49643 PKD1P6-201ENST00000343738 4769 ntBASIC21.39■■□□□ 1.02
PRIM2P49643 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PRIM2P49643 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
PRIM2P49643 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PRIM2P49643 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRIM2P49643 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRIM2P49643 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRIM2P49643 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PRIM2P49643 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PRIM2P49643 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PRIM2P49643 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.39■■□□□ 1.01
PRIM2P49643 AC131274.2-201ENST00000580697 1507 ntBASIC21.39■■□□□ 1.01
PRIM2P49643 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRIM2P49643 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms