Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CENPAP49450 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CENPAP49450 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CENPAP49450 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CENPAP49450 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.4■□□□□ 0.86
CENPAP49450 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.4■□□□□ 0.86
CENPAP49450 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.4■□□□□ 0.86
CENPAP49450 AC019171.1-201ENST00000601251 1056 ntBASIC20.4■□□□□ 0.86
CENPAP49450 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CENPAP49450 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CENPAP49450 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CENPAP49450 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.39■□□□□ 0.86
CENPAP49450 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CENPAP49450 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.39■□□□□ 0.85
CENPAP49450 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPAP49450 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPAP49450 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPAP49450 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CENPAP49450 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CENPAP49450 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CENPAP49450 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.39■□□□□ 0.85
CENPAP49450 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CENPAP49450 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CENPAP49450 AL022069.1-201ENST00000568025 1636 ntBASIC20.38■□□□□ 0.85
CENPAP49450 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CENPAP49450 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CENPAP49450 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.38■□□□□ 0.85
CENPAP49450 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CENPAP49450 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CENPAP49450 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CENPAP49450 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CENPAP49450 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.38■□□□□ 0.85
CENPAP49450 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.38■□□□□ 0.85
CENPAP49450 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CENPAP49450 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPAP49450 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPAP49450 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.37■□□□□ 0.85
CENPAP49450 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPAP49450 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.37■□□□□ 0.85
CENPAP49450 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CENPAP49450 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CENPAP49450 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPAP49450 TSPY13P-201ENST00000338964 914 ntBASIC20.37■□□□□ 0.85
CENPAP49450 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CENPAP49450 AC010980.1-201ENST00000587192 1142 ntBASIC20.37■□□□□ 0.85
CENPAP49450 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.37■□□□□ 0.85
CENPAP49450 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.37■□□□□ 0.85
CENPAP49450 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CENPAP49450 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CENPAP49450 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CENPAP49450 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CENPAP49450 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CENPAP49450 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.36■□□□□ 0.85
CENPAP49450 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CENPAP49450 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CENPAP49450 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CENPAP49450 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.36■□□□□ 0.85
CENPAP49450 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CENPAP49450 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CENPAP49450 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CENPAP49450 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CENPAP49450 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.35■□□□□ 0.85
CENPAP49450 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CENPAP49450 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CENPAP49450 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CENPAP49450 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
CENPAP49450 AC133561.1-201ENST00000568600 2415 ntBASIC20.35■□□□□ 0.85
CENPAP49450 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CENPAP49450 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CENPAP49450 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPAP49450 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.34■□□□□ 0.85
CENPAP49450 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPAP49450 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.34■□□□□ 0.85
CENPAP49450 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CENPAP49450 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CENPAP49450 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.34■□□□□ 0.85
CENPAP49450 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.34■□□□□ 0.85
CENPAP49450 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.34■□□□□ 0.85
CENPAP49450 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CENPAP49450 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPAP49450 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CENPAP49450 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CENPAP49450 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CENPAP49450 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.33■□□□□ 0.85
CENPAP49450 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CENPAP49450 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
CENPAP49450 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CENPAP49450 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.33■□□□□ 0.85
CENPAP49450 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.33■□□□□ 0.85
CENPAP49450 AC074183.2-201ENST00000623112 922 ntBASIC20.33■□□□□ 0.85
CENPAP49450 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CENPAP49450 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CENPAP49450 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CENPAP49450 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CENPAP49450 AC068473.5-201ENST00000616428 2072 ntBASIC20.33■□□□□ 0.84
CENPAP49450 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPAP49450 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.32■□□□□ 0.84
CENPAP49450 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPAP49450 AC120024.1-201ENST00000562672 995 ntBASIC20.32■□□□□ 0.84
CENPAP49450 AL033527.3-201ENST00000566366 1196 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms