Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC6A1P30531 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC6A1P30531 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A1P30531 MIR219A2-201ENST00000608502 1504 ntBASIC19.55■□□□□ 0.72
SLC6A1P30531 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A1P30531 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC6A1P30531 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A1P30531 AL359258.2-201ENST00000564063 1566 ntBASIC19.54■□□□□ 0.72
SLC6A1P30531 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A1P30531 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SLC6A1P30531 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC6A1P30531 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SLC6A1P30531 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A1P30531 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A1P30531 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A1P30531 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SLC6A1P30531 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC6A1P30531 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.54■□□□□ 0.72
SLC6A1P30531 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC6A1P30531 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A1P30531 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A1P30531 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SLC6A1P30531 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A1P30531 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.53■□□□□ 0.72
SLC6A1P30531 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A1P30531 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A1P30531 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A1P30531 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
SLC6A1P30531 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A1P30531 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC6A1P30531 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A1P30531 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A1P30531 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SLC6A1P30531 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A1P30531 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A1P30531 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.52■□□□□ 0.72
SLC6A1P30531 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC6A1P30531 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.52■□□□□ 0.71
SLC6A1P30531 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC6A1P30531 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A1P30531 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A1P30531 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A1P30531 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SLC6A1P30531 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A1P30531 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A1P30531 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SLC6A1P30531 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A1P30531 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC6A1P30531 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A1P30531 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
SLC6A1P30531 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A1P30531 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A1P30531 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A1P30531 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A1P30531 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A1P30531 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A1P30531 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A1P30531 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC6A1P30531 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
SLC6A1P30531 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A1P30531 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A1P30531 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A1P30531 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A1P30531 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A1P30531 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SLC6A1P30531 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC6A1P30531 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC6A1P30531 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A1P30531 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC6A1P30531 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A1P30531 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SLC6A1P30531 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A1P30531 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SLC6A1P30531 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A1P30531 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A1P30531 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A1P30531 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A1P30531 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A1P30531 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A1P30531 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A1P30531 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A1P30531 AC060814.1-201ENST00000554326 538 ntBASIC19.48■□□□□ 0.71
SLC6A1P30531 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A1P30531 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC6A1P30531 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A1P30531 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A1P30531 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC6A1P30531 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC6A1P30531 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A1P30531 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A1P30531 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.47■□□□□ 0.71
SLC6A1P30531 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC6A1P30531 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A1P30531 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC6A1P30531 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A1P30531 AL121603.2-201ENST00000557373 2117 ntBASIC19.47■□□□□ 0.71
SLC6A1P30531 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A1P30531 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SLC6A1P30531 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A1P30531 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms