Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.56■■□□□ 1.04
PTPN6P29350 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.56■■□□□ 1.04
PTPN6P29350 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN6P29350 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN6P29350 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.55■■□□□ 1.04
PTPN6P29350 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.55■■□□□ 1.04
PTPN6P29350 AC131274.2-201ENST00000580697 1507 ntBASIC21.55■■□□□ 1.04
PTPN6P29350 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.55■■□□□ 1.04
PTPN6P29350 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN6P29350 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PTPN6P29350 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PTPN6P29350 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.55■■□□□ 1.04
PTPN6P29350 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN6P29350 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN6P29350 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN6P29350 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.54■■□□□ 1.04
PTPN6P29350 AL022069.1-201ENST00000568025 1636 ntBASIC21.54■■□□□ 1.04
PTPN6P29350 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PTPN6P29350 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN6P29350 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN6P29350 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN6P29350 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PTPN6P29350 AL031848.2-201ENST00000607670 837 ntBASIC21.53■■□□□ 1.04
PTPN6P29350 AC011551.1-201ENST00000614101 683 ntBASIC21.53■■□□□ 1.04
PTPN6P29350 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN6P29350 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN6P29350 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PTPN6P29350 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPN6P29350 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPN6P29350 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN6P29350 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PTPN6P29350 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN6P29350 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN6P29350 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.52■■□□□ 1.04
PTPN6P29350 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.52■■□□□ 1.04
PTPN6P29350 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN6P29350 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN6P29350 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.52■■□□□ 1.04
PTPN6P29350 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN6P29350 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN6P29350 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
PTPN6P29350 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN6P29350 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.51■■□□□ 1.03
PTPN6P29350 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN6P29350 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN6P29350 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN6P29350 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PTPN6P29350 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN6P29350 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN6P29350 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PTPN6P29350 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN6P29350 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN6P29350 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN6P29350 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN6P29350 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN6P29350 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN6P29350 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
PTPN6P29350 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN6P29350 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PTPN6P29350 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN6P29350 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN6P29350 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN6P29350 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.49■■□□□ 1.03
PTPN6P29350 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN6P29350 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN6P29350 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN6P29350 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN6P29350 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN6P29350 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN6P29350 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN6P29350 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PTPN6P29350 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN6P29350 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.48■■□□□ 1.03
PTPN6P29350 AL035685.1-201ENST00000636663 812 ntBASIC21.48■■□□□ 1.03
PTPN6P29350 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.48■■□□□ 1.03
PTPN6P29350 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN6P29350 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN6P29350 AL117328.2-201ENST00000624617 1940 ntBASIC21.47■■□□□ 1.03
PTPN6P29350 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PTPN6P29350 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN6P29350 KRT18P24-201ENST00000344739 1156 ntBASIC21.47■■□□□ 1.03
PTPN6P29350 AC009299.2-201ENST00000482477 511 ntBASIC21.47■■□□□ 1.03
PTPN6P29350 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.47■■□□□ 1.03
PTPN6P29350 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN6P29350 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN6P29350 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN6P29350 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN6P29350 ALDH1A3-203ENST00000557963 1670 ntBASIC21.47■■□□□ 1.03
PTPN6P29350 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
PTPN6P29350 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN6P29350 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
PTPN6P29350 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN6P29350 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN6P29350 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PTPN6P29350 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.46■■□□□ 1.03
PTPN6P29350 C1orf229-201ENST00000623686 2258 ntBASIC21.46■■□□□ 1.03
PTPN6P29350 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PTPN6P29350 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.46■■□□□ 1.03
PTPN6P29350 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.45■■□□□ 1.02
PTPN6P29350 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms