Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
MMP11P24347 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP11P24347 AC141586.4-201ENST00000624558 1573 ntBASIC21.53■■□□□ 1.04
MMP11P24347 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP11P24347 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP11P24347 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP11P24347 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP11P24347 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MMP11P24347 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
MMP11P24347 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
MMP11P24347 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.51■■□□□ 1.03
MMP11P24347 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP11P24347 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP11P24347 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP11P24347 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP11P24347 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP11P24347 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.51■■□□□ 1.03
MMP11P24347 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP11P24347 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP11P24347 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP11P24347 AL022069.1-201ENST00000568025 1636 ntBASIC21.51■■□□□ 1.03
MMP11P24347 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
MMP11P24347 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP11P24347 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP11P24347 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP11P24347 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
MMP11P24347 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP11P24347 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP11P24347 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP11P24347 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.5■■□□□ 1.03
MMP11P24347 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.5■■□□□ 1.03
MMP11P24347 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP11P24347 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP11P24347 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP11P24347 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP11P24347 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MMP11P24347 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MMP11P24347 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MMP11P24347 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.49■■□□□ 1.03
MMP11P24347 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.49■■□□□ 1.03
MMP11P24347 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.49■■□□□ 1.03
MMP11P24347 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP11P24347 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MMP11P24347 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP11P24347 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP11P24347 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.49■■□□□ 1.03
MMP11P24347 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP11P24347 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.48■■□□□ 1.03
MMP11P24347 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
MMP11P24347 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP11P24347 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP11P24347 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.48■■□□□ 1.03
MMP11P24347 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.48■■□□□ 1.03
MMP11P24347 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.48■■□□□ 1.03
MMP11P24347 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP11P24347 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP11P24347 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP11P24347 SRD5A1P1-201ENST00000442297 786 ntBASIC21.47■■□□□ 1.03
MMP11P24347 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.47■■□□□ 1.03
MMP11P24347 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.47■■□□□ 1.03
MMP11P24347 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP11P24347 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP11P24347 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
MMP11P24347 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP11P24347 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP11P24347 AC133561.4-201ENST00000566112 224 ntBASIC21.46■■□□□ 1.03
MMP11P24347 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.46■■□□□ 1.03
MMP11P24347 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP11P24347 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
MMP11P24347 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP11P24347 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP11P24347 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP11P24347 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP11P24347 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.45■■□□□ 1.02
MMP11P24347 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP11P24347 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MMP11P24347 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP11P24347 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.45■■□□□ 1.02
MMP11P24347 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP11P24347 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP11P24347 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
MMP11P24347 AC004812.2-201ENST00000611079 2094 ntBASIC21.44■■□□□ 1.02
MMP11P24347 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP11P24347 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.44■■□□□ 1.02
MMP11P24347 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MMP11P24347 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.44■■□□□ 1.02
MMP11P24347 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP11P24347 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.44■■□□□ 1.02
MMP11P24347 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.44■■□□□ 1.02
MMP11P24347 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP11P24347 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP11P24347 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.43■■□□□ 1.02
MMP11P24347 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.43■■□□□ 1.02
MMP11P24347 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP11P24347 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
MMP11P24347 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MMP11P24347 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.43■■□□□ 1.02
MMP11P24347 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
MMP11P24347 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP11P24347 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms