Protein–RNA interactions for Protein: P20340

RAB6A, Ras-related protein Rab-6A, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6AP20340 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB6AP20340 AL022069.1-201ENST00000568025 1636 ntBASIC19.44■□□□□ 0.7
RAB6AP20340 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB6AP20340 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB6AP20340 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAB6AP20340 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB6AP20340 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RAB6AP20340 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB6AP20340 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB6AP20340 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6AP20340 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6AP20340 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RAB6AP20340 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6AP20340 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6AP20340 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB6AP20340 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB6AP20340 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
RAB6AP20340 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RAB6AP20340 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RAB6AP20340 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6AP20340 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
RAB6AP20340 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6AP20340 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6AP20340 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6AP20340 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB6AP20340 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6AP20340 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6AP20340 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB6AP20340 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6AP20340 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
RAB6AP20340 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB6AP20340 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RAB6AP20340 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6AP20340 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB6AP20340 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6AP20340 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RAB6AP20340 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RAB6AP20340 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB6AP20340 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6AP20340 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6AP20340 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RAB6AP20340 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6AP20340 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB6AP20340 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RAB6AP20340 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RAB6AP20340 AC009831.1-201ENST00000580420 1582 ntBASIC19.4■□□□□ 0.7
RAB6AP20340 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RAB6AP20340 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB6AP20340 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB6AP20340 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB6AP20340 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB6AP20340 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RAB6AP20340 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.39■□□□□ 0.7
RAB6AP20340 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
RAB6AP20340 AC137767.1-201ENST00000602918 1920 ntBASIC19.39■□□□□ 0.7
RAB6AP20340 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.39■□□□□ 0.7
RAB6AP20340 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB6AP20340 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB6AP20340 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB6AP20340 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB6AP20340 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB6AP20340 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB6AP20340 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB6AP20340 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
RAB6AP20340 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB6AP20340 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB6AP20340 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB6AP20340 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB6AP20340 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB6AP20340 ESRRAP2-201ENST00000418437 1549 ntBASIC19.38■□□□□ 0.69
RAB6AP20340 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB6AP20340 AC133552.2-201ENST00000619106 1032 ntBASIC19.38■□□□□ 0.69
RAB6AP20340 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB6AP20340 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB6AP20340 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB6AP20340 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RAB6AP20340 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB6AP20340 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB6AP20340 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB6AP20340 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB6AP20340 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB6AP20340 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RAB6AP20340 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB6AP20340 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB6AP20340 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB6AP20340 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB6AP20340 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB6AP20340 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms