Protein–RNA interactions for Protein: P20061

TCN1, Transcobalamin-1, humanhuman

Predicted RBP Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1P20061 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCN1P20061 AC092296.2-201ENST00000589470 999 ntBASIC21.69■■□□□ 1.06
TCN1P20061 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCN1P20061 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCN1P20061 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCN1P20061 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.69■■□□□ 1.06
TCN1P20061 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCN1P20061 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TCN1P20061 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCN1P20061 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCN1P20061 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCN1P20061 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCN1P20061 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCN1P20061 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.68■■□□□ 1.06
TCN1P20061 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TCN1P20061 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCN1P20061 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TCN1P20061 AC007375.3-201ENST00000600936 2314 ntBASIC21.68■■□□□ 1.06
TCN1P20061 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCN1P20061 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TCN1P20061 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCN1P20061 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TCN1P20061 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCN1P20061 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCN1P20061 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TCN1P20061 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TCN1P20061 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.67■■□□□ 1.06
TCN1P20061 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.67■■□□□ 1.06
TCN1P20061 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TCN1P20061 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
TCN1P20061 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCN1P20061 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TCN1P20061 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TCN1P20061 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCN1P20061 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCN1P20061 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCN1P20061 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TCN1P20061 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.66■■□□□ 1.06
TCN1P20061 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCN1P20061 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCN1P20061 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TCN1P20061 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TCN1P20061 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
TCN1P20061 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCN1P20061 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCN1P20061 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TCN1P20061 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
TCN1P20061 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCN1P20061 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.65■■□□□ 1.06
TCN1P20061 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCN1P20061 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCN1P20061 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.65■■□□□ 1.06
TCN1P20061 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
TCN1P20061 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TCN1P20061 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCN1P20061 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
TCN1P20061 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.64■■□□□ 1.06
TCN1P20061 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TCN1P20061 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TCN1P20061 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.64■■□□□ 1.05
TCN1P20061 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TCN1P20061 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TCN1P20061 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TCN1P20061 ECEL1P1-201ENST00000373592 1742 ntBASIC21.63■■□□□ 1.05
TCN1P20061 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCN1P20061 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.63■■□□□ 1.05
TCN1P20061 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.63■■□□□ 1.05
TCN1P20061 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TCN1P20061 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TCN1P20061 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCN1P20061 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCN1P20061 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TCN1P20061 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TCN1P20061 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TCN1P20061 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TCN1P20061 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TCN1P20061 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCN1P20061 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCN1P20061 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCN1P20061 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.63■■□□□ 1.05
TCN1P20061 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCN1P20061 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.63■■□□□ 1.05
TCN1P20061 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.63■■□□□ 1.05
TCN1P20061 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.63■■□□□ 1.05
TCN1P20061 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCN1P20061 AC127496.7-201ENST00000625110 1798 ntBASIC21.62■■□□□ 1.05
TCN1P20061 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TCN1P20061 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCN1P20061 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.62■■□□□ 1.05
TCN1P20061 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCN1P20061 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TCN1P20061 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCN1P20061 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCN1P20061 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCN1P20061 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCN1P20061 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TCN1P20061 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCN1P20061 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.61■■□□□ 1.05
TCN1P20061 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCN1P20061 ECEL1P2-201ENST00000461596 1295 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms