Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBL4AP11441 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBL4AP11441 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBL4AP11441 AC009299.2-201ENST00000482477 511 ntBASIC20.9■□□□□ 0.94
UBL4AP11441 KRT125P-201ENST00000546827 989 ntBASIC20.9■□□□□ 0.94
UBL4AP11441 Z92544.1-202ENST00000571933 1220 ntBASIC20.9■□□□□ 0.94
UBL4AP11441 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.9■□□□□ 0.94
UBL4AP11441 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBL4AP11441 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBL4AP11441 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBL4AP11441 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.89■□□□□ 0.94
UBL4AP11441 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBL4AP11441 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBL4AP11441 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
UBL4AP11441 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
UBL4AP11441 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBL4AP11441 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBL4AP11441 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.89■□□□□ 0.93
UBL4AP11441 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.89■□□□□ 0.93
UBL4AP11441 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBL4AP11441 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
UBL4AP11441 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBL4AP11441 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.89■□□□□ 0.93
UBL4AP11441 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.89■□□□□ 0.93
UBL4AP11441 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBL4AP11441 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.88■□□□□ 0.93
UBL4AP11441 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBL4AP11441 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.88■□□□□ 0.93
UBL4AP11441 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBL4AP11441 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
UBL4AP11441 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.88■□□□□ 0.93
UBL4AP11441 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
UBL4AP11441 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBL4AP11441 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
UBL4AP11441 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.88■□□□□ 0.93
UBL4AP11441 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBL4AP11441 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.88■□□□□ 0.93
UBL4AP11441 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
UBL4AP11441 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
UBL4AP11441 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.87■□□□□ 0.93
UBL4AP11441 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBL4AP11441 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.87■□□□□ 0.93
UBL4AP11441 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.87■□□□□ 0.93
UBL4AP11441 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.87■□□□□ 0.93
UBL4AP11441 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.87■□□□□ 0.93
UBL4AP11441 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBL4AP11441 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.87■□□□□ 0.93
UBL4AP11441 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.86■□□□□ 0.93
UBL4AP11441 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBL4AP11441 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
UBL4AP11441 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBL4AP11441 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
UBL4AP11441 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
UBL4AP11441 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBL4AP11441 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBL4AP11441 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBL4AP11441 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBL4AP11441 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
UBL4AP11441 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBL4AP11441 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBL4AP11441 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBL4AP11441 AL024507.2-201ENST00000606070 2574 ntBASIC20.85■□□□□ 0.93
UBL4AP11441 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.85■□□□□ 0.93
UBL4AP11441 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
UBL4AP11441 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
UBL4AP11441 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBL4AP11441 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBL4AP11441 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBL4AP11441 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBL4AP11441 AC239859.2-201ENST00000444165 318 ntBASIC20.84■□□□□ 0.93
UBL4AP11441 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBL4AP11441 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.84■□□□□ 0.93
UBL4AP11441 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.84■□□□□ 0.93
UBL4AP11441 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.84■□□□□ 0.93
UBL4AP11441 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBL4AP11441 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
UBL4AP11441 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBL4AP11441 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.84■□□□□ 0.93
UBL4AP11441 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
UBL4AP11441 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBL4AP11441 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBL4AP11441 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
UBL4AP11441 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBL4AP11441 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.83■□□□□ 0.93
UBL4AP11441 MIR4787-201ENST00000607364 84 ntBASIC20.83■□□□□ 0.93
UBL4AP11441 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBL4AP11441 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBL4AP11441 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
UBL4AP11441 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
UBL4AP11441 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.82■□□□□ 0.92
UBL4AP11441 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBL4AP11441 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
UBL4AP11441 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBL4AP11441 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBL4AP11441 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.82■□□□□ 0.92
UBL4AP11441 AC092028.1-203ENST00000608262 953 ntBASIC20.82■□□□□ 0.92
UBL4AP11441 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.82■□□□□ 0.92
UBL4AP11441 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBL4AP11441 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL4AP11441 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms