Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
THRAP10827 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
THRAP10827 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
THRAP10827 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
THRAP10827 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
THRAP10827 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
THRAP10827 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
THRAP10827 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.62■■□□□ 1.21
THRAP10827 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
THRAP10827 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
THRAP10827 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.62■■□□□ 1.21
THRAP10827 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.62■■□□□ 1.21
THRAP10827 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.62■■□□□ 1.21
THRAP10827 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
THRAP10827 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.62■■□□□ 1.21
THRAP10827 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.62■■□□□ 1.21
THRAP10827 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
THRAP10827 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
THRAP10827 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
THRAP10827 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.61■■□□□ 1.21
THRAP10827 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
THRAP10827 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.61■■□□□ 1.21
THRAP10827 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
THRAP10827 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
THRAP10827 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
THRAP10827 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.6■■□□□ 1.21
THRAP10827 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
THRAP10827 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
THRAP10827 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
THRAP10827 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
THRAP10827 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
THRAP10827 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.6■■□□□ 1.21
THRAP10827 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.6■■□□□ 1.21
THRAP10827 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.6■■□□□ 1.21
THRAP10827 AC010997.5-201ENST00000609182 354 ntBASIC22.6■■□□□ 1.21
THRAP10827 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.6■■□□□ 1.21
THRAP10827 MIR6089-201ENST00000616698 64 ntBASIC22.6■■□□□ 1.21
THRAP10827 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
THRAP10827 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
THRAP10827 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.6■■□□□ 1.21
THRAP10827 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
THRAP10827 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
THRAP10827 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.59■■□□□ 1.21
THRAP10827 MTDHP2-201ENST00000601468 714 ntBASIC22.59■■□□□ 1.21
THRAP10827 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
THRAP10827 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
THRAP10827 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
THRAP10827 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.58■■□□□ 1.21
THRAP10827 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.58■■□□□ 1.21
THRAP10827 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
THRAP10827 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
THRAP10827 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
THRAP10827 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.57■■□□□ 1.2
THRAP10827 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.57■■□□□ 1.2
THRAP10827 AF131216.4-201ENST00000638924 1588 ntBASIC22.57■■□□□ 1.2
THRAP10827 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
THRAP10827 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
THRAP10827 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.57■■□□□ 1.2
THRAP10827 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.57■■□□□ 1.2
THRAP10827 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
THRAP10827 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.57■■□□□ 1.2
THRAP10827 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
THRAP10827 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
THRAP10827 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
THRAP10827 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.56■■□□□ 1.2
THRAP10827 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.56■■□□□ 1.2
THRAP10827 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.56■■□□□ 1.2
THRAP10827 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.56■■□□□ 1.2
THRAP10827 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
THRAP10827 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
THRAP10827 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
THRAP10827 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
THRAP10827 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
THRAP10827 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
THRAP10827 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
THRAP10827 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.55■■□□□ 1.2
THRAP10827 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.55■■□□□ 1.2
THRAP10827 MIR6724-1-201ENST00000616420 92 ntBASIC22.55■■□□□ 1.2
THRAP10827 MIR6724-2-201ENST00000616483 92 ntBASIC22.55■■□□□ 1.2
THRAP10827 MIR6724-4-201ENST00000617390 92 ntBASIC22.55■■□□□ 1.2
THRAP10827 MIR6724-3-201ENST00000622482 92 ntBASIC22.55■■□□□ 1.2
THRAP10827 AL117332.1-201ENST00000622628 974 ntBASIC22.55■■□□□ 1.2
THRAP10827 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
THRAP10827 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
THRAP10827 CLDN5-201ENST00000403084 2357 ntBASIC22.55■■□□□ 1.2
THRAP10827 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
THRAP10827 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
THRAP10827 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
THRAP10827 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
THRAP10827 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
THRAP10827 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.54■■□□□ 1.2
THRAP10827 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
THRAP10827 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.54■■□□□ 1.2
THRAP10827 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
THRAP10827 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.54■■□□□ 1.2
THRAP10827 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.54■■□□□ 1.2
THRAP10827 AC131281.2-201ENST00000520478 145 ntBASIC22.54■■□□□ 1.2
THRAP10827 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
THRAP10827 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.54■■□□□ 1.2
THRAP10827 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms