Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.4■■□□□ 1.02
RAB40ALP0C0E4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.39■■□□□ 1.02
RAB40ALP0C0E4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAB40ALP0C0E4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.39■■□□□ 1.01
RAB40ALP0C0E4 SERBP1P1-201ENST00000396021 1160 ntBASIC21.39■■□□□ 1.01
RAB40ALP0C0E4 MIR939-201ENST00000401314 82 ntBASIC21.39■■□□□ 1.01
RAB40ALP0C0E4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.39■■□□□ 1.01
RAB40ALP0C0E4 AC011298.3-201ENST00000615796 283 ntBASIC21.39■■□□□ 1.01
RAB40ALP0C0E4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.39■■□□□ 1.01
RAB40ALP0C0E4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAB40ALP0C0E4 HLA-L-211ENST00000482052 1765 ntBASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 AF213884.3-201ENST00000563833 479 ntBASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40ALP0C0E4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 AP001330.3-201ENST00000520123 633 ntBASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 MIR4767-201ENST00000582827 78 ntBASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RAB40ALP0C0E4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RAB40ALP0C0E4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB40ALP0C0E4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB40ALP0C0E4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB40ALP0C0E4 AC091305.1-201ENST00000479476 895 ntBASIC21.36■■□□□ 1.01
RAB40ALP0C0E4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.36■■□□□ 1.01
RAB40ALP0C0E4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RAB40ALP0C0E4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.36■■□□□ 1.01
RAB40ALP0C0E4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RAB40ALP0C0E4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAB40ALP0C0E4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAB40ALP0C0E4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB40ALP0C0E4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAB40ALP0C0E4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.35■■□□□ 1.01
RAB40ALP0C0E4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
RAB40ALP0C0E4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RAB40ALP0C0E4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.35■■□□□ 1.01
RAB40ALP0C0E4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.35■■□□□ 1.01
RAB40ALP0C0E4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB40ALP0C0E4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB40ALP0C0E4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB40ALP0C0E4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RAB40ALP0C0E4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAB40ALP0C0E4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RAB40ALP0C0E4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40ALP0C0E4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40ALP0C0E4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40ALP0C0E4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40ALP0C0E4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40ALP0C0E4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40ALP0C0E4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40ALP0C0E4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40ALP0C0E4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
RAB40ALP0C0E4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.34■■□□□ 1.01
RAB40ALP0C0E4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40ALP0C0E4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
RAB40ALP0C0E4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAB40ALP0C0E4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAB40ALP0C0E4 AC105265.2-201ENST00000467189 838 ntBASIC21.33■■□□□ 1.01
RAB40ALP0C0E4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
RAB40ALP0C0E4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAB40ALP0C0E4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RAB40ALP0C0E4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB40ALP0C0E4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAB40ALP0C0E4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB40ALP0C0E4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB40ALP0C0E4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.32■■□□□ 1
RAB40ALP0C0E4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.32■■□□□ 1
RAB40ALP0C0E4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.32■■□□□ 1
RAB40ALP0C0E4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.32■■□□□ 1
RAB40ALP0C0E4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RAB40ALP0C0E4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RAB40ALP0C0E4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB40ALP0C0E4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms