Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CD3DP04234 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD3DP04234 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD3DP04234 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD3DP04234 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD3DP04234 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.22■□□□□ 0.67
CD3DP04234 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD3DP04234 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CD3DP04234 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD3DP04234 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD3DP04234 RP9P-202ENST00000450133 1212 ntBASIC19.22■□□□□ 0.67
CD3DP04234 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.22■□□□□ 0.67
CD3DP04234 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD3DP04234 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.22■□□□□ 0.67
CD3DP04234 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD3DP04234 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CD3DP04234 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CD3DP04234 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD3DP04234 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD3DP04234 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.21■□□□□ 0.67
CD3DP04234 AC242852.2-201ENST00000615738 1807 ntBASIC19.21■□□□□ 0.67
CD3DP04234 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.21■□□□□ 0.67
CD3DP04234 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CD3DP04234 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.21■□□□□ 0.67
CD3DP04234 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.21■□□□□ 0.67
CD3DP04234 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.21■□□□□ 0.67
CD3DP04234 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CD3DP04234 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CD3DP04234 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.21■□□□□ 0.67
CD3DP04234 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.21■□□□□ 0.67
CD3DP04234 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.21■□□□□ 0.67
CD3DP04234 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD3DP04234 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD3DP04234 AL137060.1-201ENST00000618151 2648 ntBASIC19.2■□□□□ 0.66
CD3DP04234 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.2■□□□□ 0.66
CD3DP04234 AC093536.1-201ENST00000569153 554 ntBASIC19.2■□□□□ 0.66
CD3DP04234 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD3DP04234 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.2■□□□□ 0.66
CD3DP04234 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD3DP04234 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD3DP04234 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD3DP04234 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.19■□□□□ 0.66
CD3DP04234 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.19■□□□□ 0.66
CD3DP04234 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD3DP04234 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD3DP04234 KRT18P10-201ENST00000388836 1287 ntBASIC19.19■□□□□ 0.66
CD3DP04234 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD3DP04234 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD3DP04234 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
CD3DP04234 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD3DP04234 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.19■□□□□ 0.66
CD3DP04234 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CD3DP04234 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CD3DP04234 AL161729.1-201ENST00000604104 1402 ntBASIC19.18■□□□□ 0.66
CD3DP04234 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD3DP04234 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD3DP04234 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD3DP04234 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD3DP04234 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CD3DP04234 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD3DP04234 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD3DP04234 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD3DP04234 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD3DP04234 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD3DP04234 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD3DP04234 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD3DP04234 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD3DP04234 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD3DP04234 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD3DP04234 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD3DP04234 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD3DP04234 AC092296.2-201ENST00000589470 999 ntBASIC19.17■□□□□ 0.66
CD3DP04234 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.17■□□□□ 0.66
CD3DP04234 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD3DP04234 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD3DP04234 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD3DP04234 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.17■□□□□ 0.66
CD3DP04234 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD3DP04234 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.17■□□□□ 0.66
CD3DP04234 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CD3DP04234 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.17■□□□□ 0.66
CD3DP04234 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.16■□□□□ 0.66
CD3DP04234 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD3DP04234 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD3DP04234 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CD3DP04234 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
CD3DP04234 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CD3DP04234 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.16■□□□□ 0.66
CD3DP04234 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD3DP04234 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.16■□□□□ 0.66
CD3DP04234 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.16■□□□□ 0.66
CD3DP04234 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.16■□□□□ 0.66
CD3DP04234 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.16■□□□□ 0.66
CD3DP04234 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD3DP04234 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.16■□□□□ 0.66
CD3DP04234 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.16■□□□□ 0.66
CD3DP04234 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD3DP04234 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CD3DP04234 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD3DP04234 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms