Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ALDH1A1P00352 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ALDH1A1P00352 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ALDH1A1P00352 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ALDH1A1P00352 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ALDH1A1P00352 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ALDH1A1P00352 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.31■■□□□ 1.8
ALDH1A1P00352 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
ALDH1A1P00352 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
ALDH1A1P00352 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
ALDH1A1P00352 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ALDH1A1P00352 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
ALDH1A1P00352 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.3■■□□□ 1.8
ALDH1A1P00352 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
ALDH1A1P00352 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ALDH1A1P00352 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ALDH1A1P00352 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ALDH1A1P00352 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.29■■□□□ 1.8
ALDH1A1P00352 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.29■■□□□ 1.8
ALDH1A1P00352 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ALDH1A1P00352 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
ALDH1A1P00352 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ALDH1A1P00352 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ALDH1A1P00352 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ALDH1A1P00352 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
ALDH1A1P00352 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ALDH1A1P00352 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
ALDH1A1P00352 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.28■■□□□ 1.8
ALDH1A1P00352 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
ALDH1A1P00352 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.28■■□□□ 1.8
ALDH1A1P00352 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ALDH1A1P00352 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ALDH1A1P00352 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.27■■□□□ 1.8
ALDH1A1P00352 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.27■■□□□ 1.8
ALDH1A1P00352 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ALDH1A1P00352 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ALDH1A1P00352 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.27■■□□□ 1.8
ALDH1A1P00352 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
ALDH1A1P00352 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.27■■□□□ 1.8
ALDH1A1P00352 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.27■■□□□ 1.8
ALDH1A1P00352 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
ALDH1A1P00352 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.27■■□□□ 1.8
ALDH1A1P00352 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ALDH1A1P00352 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.26■■□□□ 1.79
ALDH1A1P00352 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.26■■□□□ 1.79
ALDH1A1P00352 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.26■■□□□ 1.79
ALDH1A1P00352 ABHD17AP1-201ENST00000358206 933 ntBASIC26.26■■□□□ 1.79
ALDH1A1P00352 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ALDH1A1P00352 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ALDH1A1P00352 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ALDH1A1P00352 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26.26■■□□□ 1.79
ALDH1A1P00352 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.26■■□□□ 1.79
ALDH1A1P00352 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.26■■□□□ 1.79
ALDH1A1P00352 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ALDH1A1P00352 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.25■■□□□ 1.79
ALDH1A1P00352 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.25■■□□□ 1.79
ALDH1A1P00352 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ALDH1A1P00352 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ALDH1A1P00352 AC006015.1-201ENST00000429970 570 ntBASIC26.25■■□□□ 1.79
ALDH1A1P00352 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.25■■□□□ 1.79
ALDH1A1P00352 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.25■■□□□ 1.79
ALDH1A1P00352 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.25■■□□□ 1.79
ALDH1A1P00352 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.25■■□□□ 1.79
ALDH1A1P00352 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ALDH1A1P00352 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ALDH1A1P00352 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.25■■□□□ 1.79
ALDH1A1P00352 AC141586.4-201ENST00000624558 1573 ntBASIC26.24■■□□□ 1.79
ALDH1A1P00352 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ALDH1A1P00352 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.24■■□□□ 1.79
ALDH1A1P00352 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
ALDH1A1P00352 RAP2CP1-201ENST00000605103 478 ntBASIC26.24■■□□□ 1.79
ALDH1A1P00352 ERN1-208ENST00000606895 2068 ntBASIC26.24■■□□□ 1.79
ALDH1A1P00352 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.24■■□□□ 1.79
ALDH1A1P00352 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
ALDH1A1P00352 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ALDH1A1P00352 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.23■■□□□ 1.79
ALDH1A1P00352 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
ALDH1A1P00352 ESRRAP2-201ENST00000418437 1549 ntBASIC26.23■■□□□ 1.79
ALDH1A1P00352 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
ALDH1A1P00352 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.23■■□□□ 1.79
ALDH1A1P00352 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.23■■□□□ 1.79
ALDH1A1P00352 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.22■■□□□ 1.79
ALDH1A1P00352 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ALDH1A1P00352 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ALDH1A1P00352 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.22■■□□□ 1.79
ALDH1A1P00352 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.22■■□□□ 1.79
ALDH1A1P00352 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.21■■□□□ 1.79
ALDH1A1P00352 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ALDH1A1P00352 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
ALDH1A1P00352 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ALDH1A1P00352 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.21■■□□□ 1.79
ALDH1A1P00352 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
ALDH1A1P00352 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ALDH1A1P00352 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.21■■□□□ 1.79
ALDH1A1P00352 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.21■■□□□ 1.79
ALDH1A1P00352 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ALDH1A1P00352 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
ALDH1A1P00352 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.2■■□□□ 1.79
ALDH1A1P00352 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
ALDH1A1P00352 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms