Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GGPS1O95749 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GGPS1O95749 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.59■■□□□ 1.69
GGPS1O95749 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.59■■□□□ 1.69
GGPS1O95749 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.59■■□□□ 1.69
GGPS1O95749 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.59■■□□□ 1.69
GGPS1O95749 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.59■■□□□ 1.69
GGPS1O95749 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GGPS1O95749 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GGPS1O95749 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GGPS1O95749 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GGPS1O95749 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GGPS1O95749 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.59■■□□□ 1.69
GGPS1O95749 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
GGPS1O95749 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GGPS1O95749 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
GGPS1O95749 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
GGPS1O95749 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
GGPS1O95749 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.58■■□□□ 1.69
GGPS1O95749 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.58■■□□□ 1.69
GGPS1O95749 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
GGPS1O95749 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
GGPS1O95749 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
GGPS1O95749 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
GGPS1O95749 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
GGPS1O95749 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
GGPS1O95749 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
GGPS1O95749 AF213884.3-201ENST00000563833 479 ntBASIC25.57■■□□□ 1.68
GGPS1O95749 MIR4767-201ENST00000582827 78 ntBASIC25.57■■□□□ 1.68
GGPS1O95749 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.57■■□□□ 1.68
GGPS1O95749 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
GGPS1O95749 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
GGPS1O95749 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.57■■□□□ 1.68
GGPS1O95749 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
GGPS1O95749 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
GGPS1O95749 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
GGPS1O95749 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.56■■□□□ 1.68
GGPS1O95749 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.56■■□□□ 1.68
GGPS1O95749 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.56■■□□□ 1.68
GGPS1O95749 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
GGPS1O95749 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
GGPS1O95749 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
GGPS1O95749 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
GGPS1O95749 AC138932.3-201ENST00000567634 1902 ntBASIC25.55■■□□□ 1.68
GGPS1O95749 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
GGPS1O95749 AL136967.2-201ENST00000623968 743 ntBASIC25.55■■□□□ 1.68
GGPS1O95749 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
GGPS1O95749 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
GGPS1O95749 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
GGPS1O95749 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
GGPS1O95749 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
GGPS1O95749 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
GGPS1O95749 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.54■■□□□ 1.68
GGPS1O95749 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
GGPS1O95749 AP001330.3-201ENST00000520123 633 ntBASIC25.54■■□□□ 1.68
GGPS1O95749 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.54■■□□□ 1.68
GGPS1O95749 AC241377.3-202ENST00000626088 1088 ntBASIC25.54■■□□□ 1.68
GGPS1O95749 AC241585.3-202ENST00000628937 1088 ntBASIC25.54■■□□□ 1.68
GGPS1O95749 AC245100.8-202ENST00000629247 1058 ntBASIC25.54■■□□□ 1.68
GGPS1O95749 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
GGPS1O95749 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
GGPS1O95749 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.54■■□□□ 1.68
GGPS1O95749 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
GGPS1O95749 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
GGPS1O95749 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
GGPS1O95749 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
GGPS1O95749 AC142381.3-201ENST00000568208 1670 ntBASIC25.53■■□□□ 1.68
GGPS1O95749 MIR939-201ENST00000401314 82 ntBASIC25.53■■□□□ 1.68
GGPS1O95749 AC006455.2-201ENST00000429931 906 ntBASIC25.53■■□□□ 1.68
GGPS1O95749 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
GGPS1O95749 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.53■■□□□ 1.68
GGPS1O95749 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
GGPS1O95749 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
GGPS1O95749 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.52■■□□□ 1.68
GGPS1O95749 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.52■■□□□ 1.68
GGPS1O95749 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
GGPS1O95749 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
GGPS1O95749 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.51■■□□□ 1.67
GGPS1O95749 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
GGPS1O95749 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
GGPS1O95749 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
GGPS1O95749 AL138724.1-201ENST00000606771 1088 ntBASIC25.51■■□□□ 1.67
GGPS1O95749 AC011298.3-201ENST00000615796 283 ntBASIC25.51■■□□□ 1.67
GGPS1O95749 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.51■■□□□ 1.67
GGPS1O95749 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
GGPS1O95749 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
GGPS1O95749 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
GGPS1O95749 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
GGPS1O95749 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
GGPS1O95749 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
GGPS1O95749 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.5■■□□□ 1.67
GGPS1O95749 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
GGPS1O95749 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
GGPS1O95749 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
GGPS1O95749 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.49■■□□□ 1.67
GGPS1O95749 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
GGPS1O95749 AC105265.2-201ENST00000467189 838 ntBASIC25.49■■□□□ 1.67
GGPS1O95749 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.49■■□□□ 1.67
GGPS1O95749 AC009086.3-201ENST00000623486 1008 ntBASIC25.49■■□□□ 1.67
GGPS1O95749 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms