Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ALX3O95076 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALX3O95076 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ALX3O95076 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALX3O95076 AC018755.3-202ENST00000596210 929 ntBASIC19.91■□□□□ 0.78
ALX3O95076 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALX3O95076 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.91■□□□□ 0.78
ALX3O95076 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ALX3O95076 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
ALX3O95076 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALX3O95076 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALX3O95076 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALX3O95076 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALX3O95076 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ALX3O95076 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALX3O95076 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALX3O95076 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ALX3O95076 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.9■□□□□ 0.78
ALX3O95076 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.9■□□□□ 0.78
ALX3O95076 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALX3O95076 AC087393.1-201ENST00000582896 145 ntBASIC19.9■□□□□ 0.78
ALX3O95076 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
ALX3O95076 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.9■□□□□ 0.78
ALX3O95076 AC090877.2-201ENST00000558441 1738 ntBASIC19.9■□□□□ 0.78
ALX3O95076 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ALX3O95076 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ALX3O95076 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALX3O95076 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALX3O95076 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALX3O95076 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALX3O95076 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALX3O95076 AL592295.1-201ENST00000400984 884 ntBASIC19.89■□□□□ 0.77
ALX3O95076 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALX3O95076 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALX3O95076 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ALX3O95076 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALX3O95076 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ALX3O95076 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALX3O95076 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALX3O95076 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALX3O95076 AC233723.2-201ENST00000623798 2106 ntBASIC19.88■□□□□ 0.77
ALX3O95076 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX3O95076 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX3O95076 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALX3O95076 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX3O95076 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.88■□□□□ 0.77
ALX3O95076 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX3O95076 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX3O95076 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX3O95076 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALX3O95076 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALX3O95076 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALX3O95076 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
ALX3O95076 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ALX3O95076 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALX3O95076 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALX3O95076 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.87■□□□□ 0.77
ALX3O95076 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALX3O95076 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ALX3O95076 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.87■□□□□ 0.77
ALX3O95076 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.87■□□□□ 0.77
ALX3O95076 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALX3O95076 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALX3O95076 DUSP8P3-201ENST00000399571 1760 ntBASIC19.87■□□□□ 0.77
ALX3O95076 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALX3O95076 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALX3O95076 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
ALX3O95076 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.86■□□□□ 0.77
ALX3O95076 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALX3O95076 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALX3O95076 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ALX3O95076 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ALX3O95076 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ALX3O95076 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALX3O95076 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.86■□□□□ 0.77
ALX3O95076 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.86■□□□□ 0.77
ALX3O95076 AL592293.1-201ENST00000502889 1188 ntBASIC19.86■□□□□ 0.77
ALX3O95076 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALX3O95076 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ALX3O95076 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALX3O95076 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALX3O95076 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALX3O95076 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALX3O95076 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALX3O95076 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALX3O95076 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.85■□□□□ 0.77
ALX3O95076 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALX3O95076 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.85■□□□□ 0.77
ALX3O95076 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ALX3O95076 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.85■□□□□ 0.77
ALX3O95076 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.85■□□□□ 0.77
ALX3O95076 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALX3O95076 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALX3O95076 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALX3O95076 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ALX3O95076 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALX3O95076 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALX3O95076 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ALX3O95076 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.85■□□□□ 0.77
ALX3O95076 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms