Protein–RNA interactions for Protein: O76075

DFFB, DNA fragmentation factor subunit beta, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFBO76075 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
DFFBO76075 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
DFFBO76075 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DFFBO76075 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.39■□□□□ 0.53
DFFBO76075 AC025884.2-201ENST00000553429 711 ntBASIC18.39■□□□□ 0.53
DFFBO76075 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.39■□□□□ 0.53
DFFBO76075 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DFFBO76075 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DFFBO76075 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DFFBO76075 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DFFBO76075 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
DFFBO76075 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
DFFBO76075 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DFFBO76075 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.38■□□□□ 0.53
DFFBO76075 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.38■□□□□ 0.53
DFFBO76075 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DFFBO76075 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.38■□□□□ 0.53
DFFBO76075 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
DFFBO76075 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
DFFBO76075 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DFFBO76075 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DFFBO76075 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
DFFBO76075 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DFFBO76075 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.37■□□□□ 0.53
DFFBO76075 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DFFBO76075 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DFFBO76075 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DFFBO76075 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.37■□□□□ 0.53
DFFBO76075 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DFFBO76075 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DFFBO76075 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
DFFBO76075 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DFFBO76075 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DFFBO76075 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DFFBO76075 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DFFBO76075 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DFFBO76075 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DFFBO76075 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DFFBO76075 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.36■□□□□ 0.53
DFFBO76075 MIR3960-201ENST00000583311 91 ntBASIC18.36■□□□□ 0.53
DFFBO76075 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DFFBO76075 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DFFBO76075 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.36■□□□□ 0.53
DFFBO76075 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DFFBO76075 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.36■□□□□ 0.53
DFFBO76075 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DFFBO76075 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
DFFBO76075 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.35■□□□□ 0.53
DFFBO76075 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
DFFBO76075 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DFFBO76075 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DFFBO76075 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.35■□□□□ 0.53
DFFBO76075 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.35■□□□□ 0.53
DFFBO76075 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DFFBO76075 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.35■□□□□ 0.53
DFFBO76075 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.35■□□□□ 0.53
DFFBO76075 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DFFBO76075 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DFFBO76075 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DFFBO76075 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DFFBO76075 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.35■□□□□ 0.53
DFFBO76075 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DFFBO76075 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DFFBO76075 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.34■□□□□ 0.53
DFFBO76075 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DFFBO76075 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DFFBO76075 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.34■□□□□ 0.53
DFFBO76075 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DFFBO76075 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DFFBO76075 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
DFFBO76075 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DFFBO76075 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.33■□□□□ 0.53
DFFBO76075 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
DFFBO76075 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
DFFBO76075 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DFFBO76075 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DFFBO76075 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DFFBO76075 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.33■□□□□ 0.52
DFFBO76075 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.33■□□□□ 0.52
DFFBO76075 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DFFBO76075 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFBO76075 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.33■□□□□ 0.52
DFFBO76075 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
DFFBO76075 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DFFBO76075 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
DFFBO76075 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DFFBO76075 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DFFBO76075 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DFFBO76075 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DFFBO76075 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DFFBO76075 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.32■□□□□ 0.52
DFFBO76075 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.32■□□□□ 0.52
DFFBO76075 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DFFBO76075 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
DFFBO76075 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DFFBO76075 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DFFBO76075 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DFFBO76075 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
DFFBO76075 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DFFBO76075 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms