Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM3O75382 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM3O75382 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM3O75382 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM3O75382 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM3O75382 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM3O75382 LINC01124-201ENST00000409786 2117 ntBASIC21.02■□□□□ 0.96
TRIM3O75382 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM3O75382 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM3O75382 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM3O75382 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM3O75382 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM3O75382 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM3O75382 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.02■□□□□ 0.96
TRIM3O75382 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM3O75382 HLA-L-211ENST00000482052 1765 ntBASIC21.02■□□□□ 0.96
TRIM3O75382 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM3O75382 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM3O75382 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM3O75382 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM3O75382 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
TRIM3O75382 AC141586.4-201ENST00000624558 1573 ntBASIC21.02■□□□□ 0.95
TRIM3O75382 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM3O75382 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM3O75382 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM3O75382 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM3O75382 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM3O75382 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM3O75382 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM3O75382 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM3O75382 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM3O75382 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM3O75382 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21■□□□□ 0.95
TRIM3O75382 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM3O75382 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM3O75382 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM3O75382 CD72-202ENST00000378430 585 ntTSL 3 BASIC21■□□□□ 0.95
TRIM3O75382 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21■□□□□ 0.95
TRIM3O75382 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21■□□□□ 0.95
TRIM3O75382 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM3O75382 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21■□□□□ 0.95
TRIM3O75382 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRIM3O75382 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21■□□□□ 0.95
TRIM3O75382 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM3O75382 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM3O75382 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM3O75382 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM3O75382 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM3O75382 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM3O75382 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM3O75382 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM3O75382 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM3O75382 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM3O75382 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM3O75382 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM3O75382 AL022069.1-201ENST00000568025 1636 ntBASIC20.98■□□□□ 0.95
TRIM3O75382 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.98■□□□□ 0.95
TRIM3O75382 AL117332.1-201ENST00000622628 974 ntBASIC20.98■□□□□ 0.95
TRIM3O75382 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRIM3O75382 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
TRIM3O75382 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM3O75382 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM3O75382 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM3O75382 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
TRIM3O75382 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM3O75382 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM3O75382 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM3O75382 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.97■□□□□ 0.95
TRIM3O75382 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM3O75382 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM3O75382 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM3O75382 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM3O75382 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM3O75382 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM3O75382 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM3O75382 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM3O75382 MIR3621-201ENST00000580529 85 ntBASIC20.96■□□□□ 0.95
TRIM3O75382 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TRIM3O75382 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM3O75382 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM3O75382 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRIM3O75382 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM3O75382 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM3O75382 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM3O75382 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM3O75382 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM3O75382 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TRIM3O75382 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM3O75382 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM3O75382 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM3O75382 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TRIM3O75382 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TRIM3O75382 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRIM3O75382 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM3O75382 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRIM3O75382 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TRIM3O75382 AL161729.1-201ENST00000604104 1402 ntBASIC20.94■□□□□ 0.94
TRIM3O75382 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM3O75382 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM3O75382 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms