Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.12■■□□□ 1.45
TBC1D4O60343 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TBC1D4O60343 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
TBC1D4O60343 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TBC1D4O60343 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
TBC1D4O60343 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.11■■□□□ 1.45
TBC1D4O60343 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.11■■□□□ 1.45
TBC1D4O60343 AP001330.3-201ENST00000520123 633 ntBASIC24.11■■□□□ 1.45
TBC1D4O60343 AC241377.3-202ENST00000626088 1088 ntBASIC24.11■■□□□ 1.45
TBC1D4O60343 AC241585.3-202ENST00000628937 1088 ntBASIC24.11■■□□□ 1.45
TBC1D4O60343 AC245100.8-202ENST00000629247 1058 ntBASIC24.11■■□□□ 1.45
TBC1D4O60343 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TBC1D4O60343 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TBC1D4O60343 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.11■■□□□ 1.45
TBC1D4O60343 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.11■■□□□ 1.45
TBC1D4O60343 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D4O60343 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D4O60343 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D4O60343 AC135731.1-201ENST00000569415 2548 ntBASIC24.1■■□□□ 1.45
TBC1D4O60343 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D4O60343 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.1■■□□□ 1.45
TBC1D4O60343 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.1■■□□□ 1.45
TBC1D4O60343 AF213884.3-201ENST00000563833 479 ntBASIC24.1■■□□□ 1.45
TBC1D4O60343 AC011298.3-201ENST00000615796 283 ntBASIC24.1■■□□□ 1.45
TBC1D4O60343 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D4O60343 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D4O60343 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D4O60343 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D4O60343 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D4O60343 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.1■■□□□ 1.45
TBC1D4O60343 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.1■■□□□ 1.45
TBC1D4O60343 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D4O60343 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D4O60343 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D4O60343 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.09■■□□□ 1.45
TBC1D4O60343 AC142381.3-201ENST00000568208 1670 ntBASIC24.09■■□□□ 1.45
TBC1D4O60343 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.09■■□□□ 1.45
TBC1D4O60343 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.09■■□□□ 1.45
TBC1D4O60343 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.09■■□□□ 1.45
TBC1D4O60343 AC138932.3-201ENST00000567634 1902 ntBASIC24.09■■□□□ 1.45
TBC1D4O60343 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TBC1D4O60343 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TBC1D4O60343 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TBC1D4O60343 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.09■■□□□ 1.45
TBC1D4O60343 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TBC1D4O60343 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.09■■□□□ 1.45
TBC1D4O60343 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TBC1D4O60343 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TBC1D4O60343 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.08■■□□□ 1.45
TBC1D4O60343 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.08■■□□□ 1.45
TBC1D4O60343 RARRES2P6-201ENST00000567333 442 ntBASIC24.08■■□□□ 1.45
TBC1D4O60343 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TBC1D4O60343 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TBC1D4O60343 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TBC1D4O60343 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TBC1D4O60343 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
TBC1D4O60343 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TBC1D4O60343 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.07■■□□□ 1.44
TBC1D4O60343 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.07■■□□□ 1.44
TBC1D4O60343 AC006455.2-201ENST00000429931 906 ntBASIC24.07■■□□□ 1.44
TBC1D4O60343 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TBC1D4O60343 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.07■■□□□ 1.44
TBC1D4O60343 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.07■■□□□ 1.44
TBC1D4O60343 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
TBC1D4O60343 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TBC1D4O60343 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TBC1D4O60343 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TBC1D4O60343 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
TBC1D4O60343 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
TBC1D4O60343 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TBC1D4O60343 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.05■■□□□ 1.44
TBC1D4O60343 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.05■■□□□ 1.44
TBC1D4O60343 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.05■■□□□ 1.44
TBC1D4O60343 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.05■■□□□ 1.44
TBC1D4O60343 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.05■■□□□ 1.44
TBC1D4O60343 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TBC1D4O60343 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.05■■□□□ 1.44
TBC1D4O60343 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TBC1D4O60343 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
TBC1D4O60343 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TBC1D4O60343 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TBC1D4O60343 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TBC1D4O60343 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TBC1D4O60343 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TBC1D4O60343 AC091305.1-201ENST00000479476 895 ntBASIC24.04■■□□□ 1.44
TBC1D4O60343 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TBC1D4O60343 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
TBC1D4O60343 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TBC1D4O60343 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TBC1D4O60343 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TBC1D4O60343 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.03■■□□□ 1.44
TBC1D4O60343 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.03■■□□□ 1.44
TBC1D4O60343 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.03■■□□□ 1.44
TBC1D4O60343 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.03■■□□□ 1.44
TBC1D4O60343 MIR3181-201ENST00000578512 73 ntBASIC24.03■■□□□ 1.44
TBC1D4O60343 AC136469.2-201ENST00000623944 1028 ntBASIC24.03■■□□□ 1.44
TBC1D4O60343 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
TBC1D4O60343 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.03■■□□□ 1.44
TBC1D4O60343 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TBC1D4O60343 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms