Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSSCA1O60232 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SSSCA1O60232 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SSSCA1O60232 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.46■□□□□ 0.54
SSSCA1O60232 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSSCA1O60232 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.45■□□□□ 0.54
SSSCA1O60232 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSSCA1O60232 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSSCA1O60232 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSSCA1O60232 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
SSSCA1O60232 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSSCA1O60232 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSSCA1O60232 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSSCA1O60232 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSSCA1O60232 AC093536.1-201ENST00000569153 554 ntBASIC18.45■□□□□ 0.54
SSSCA1O60232 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSSCA1O60232 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.45■□□□□ 0.54
SSSCA1O60232 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SSSCA1O60232 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.45■□□□□ 0.54
SSSCA1O60232 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSSCA1O60232 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSSCA1O60232 AC137767.1-201ENST00000602918 1920 ntBASIC18.45■□□□□ 0.54
SSSCA1O60232 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSSCA1O60232 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SSSCA1O60232 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSSCA1O60232 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSSCA1O60232 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSSCA1O60232 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSSCA1O60232 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSSCA1O60232 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.44■□□□□ 0.54
SSSCA1O60232 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.44■□□□□ 0.54
SSSCA1O60232 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSSCA1O60232 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.44■□□□□ 0.54
SSSCA1O60232 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.44■□□□□ 0.54
SSSCA1O60232 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SSSCA1O60232 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.44■□□□□ 0.54
SSSCA1O60232 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSSCA1O60232 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSSCA1O60232 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSSCA1O60232 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSSCA1O60232 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SSSCA1O60232 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.44■□□□□ 0.54
SSSCA1O60232 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.43■□□□□ 0.54
SSSCA1O60232 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSSCA1O60232 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.43■□□□□ 0.54
SSSCA1O60232 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSSCA1O60232 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SSSCA1O60232 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SSSCA1O60232 KRT18P10-201ENST00000388836 1287 ntBASIC18.43■□□□□ 0.54
SSSCA1O60232 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.43■□□□□ 0.54
SSSCA1O60232 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSSCA1O60232 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSSCA1O60232 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSSCA1O60232 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SSSCA1O60232 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSSCA1O60232 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SSSCA1O60232 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SSSCA1O60232 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSSCA1O60232 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSSCA1O60232 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.42■□□□□ 0.54
SSSCA1O60232 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.42■□□□□ 0.54
SSSCA1O60232 MIR3648-2-201ENST00000581792 180 ntBASIC18.42■□□□□ 0.54
SSSCA1O60232 MIR3648-1-201ENST00000615959 180 ntBASIC18.42■□□□□ 0.54
SSSCA1O60232 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SSSCA1O60232 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SSSCA1O60232 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.42■□□□□ 0.54
SSSCA1O60232 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SSSCA1O60232 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSSCA1O60232 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SSSCA1O60232 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SSSCA1O60232 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSSCA1O60232 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSSCA1O60232 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.41■□□□□ 0.54
SSSCA1O60232 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SSSCA1O60232 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.41■□□□□ 0.54
SSSCA1O60232 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.41■□□□□ 0.54
SSSCA1O60232 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SSSCA1O60232 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.41■□□□□ 0.54
SSSCA1O60232 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSSCA1O60232 AC007375.3-201ENST00000600936 2314 ntBASIC18.4■□□□□ 0.54
SSSCA1O60232 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSSCA1O60232 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSSCA1O60232 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSSCA1O60232 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.4■□□□□ 0.54
SSSCA1O60232 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SSSCA1O60232 AC092296.2-201ENST00000589470 999 ntBASIC18.4■□□□□ 0.54
SSSCA1O60232 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSSCA1O60232 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSSCA1O60232 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
SSSCA1O60232 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.4■□□□□ 0.54
SSSCA1O60232 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
SSSCA1O60232 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSSCA1O60232 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSSCA1O60232 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSSCA1O60232 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.39■□□□□ 0.53
SSSCA1O60232 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SSSCA1O60232 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SSSCA1O60232 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SSSCA1O60232 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSSCA1O60232 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms