Protein–RNA interactions for Protein: O43916

CHST1, Carbohydrate sulfotransferase 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHST1O43916 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHST1O43916 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHST1O43916 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CHST1O43916 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CHST1O43916 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHST1O43916 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHST1O43916 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHST1O43916 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHST1O43916 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHST1O43916 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHST1O43916 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHST1O43916 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHST1O43916 MIR4281-201ENST00000580852 62 ntBASIC18.82■□□□□ 0.6
CHST1O43916 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHST1O43916 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHST1O43916 FOXO3B-201ENST00000395675 1928 ntBASIC18.82■□□□□ 0.6
CHST1O43916 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CHST1O43916 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHST1O43916 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHST1O43916 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHST1O43916 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHST1O43916 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHST1O43916 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CHST1O43916 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHST1O43916 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHST1O43916 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHST1O43916 BX664725.1-201ENST00000438252 379 ntBASIC18.81■□□□□ 0.6
CHST1O43916 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.81■□□□□ 0.6
CHST1O43916 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHST1O43916 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHST1O43916 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHST1O43916 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHST1O43916 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHST1O43916 AL117328.2-201ENST00000624617 1940 ntBASIC18.8■□□□□ 0.6
CHST1O43916 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.8■□□□□ 0.6
CHST1O43916 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHST1O43916 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.8■□□□□ 0.6
CHST1O43916 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHST1O43916 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHST1O43916 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHST1O43916 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHST1O43916 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHST1O43916 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.8■□□□□ 0.6
CHST1O43916 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHST1O43916 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHST1O43916 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.8■□□□□ 0.6
CHST1O43916 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.8■□□□□ 0.6
CHST1O43916 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CHST1O43916 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CHST1O43916 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHST1O43916 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHST1O43916 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHST1O43916 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHST1O43916 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHST1O43916 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHST1O43916 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
CHST1O43916 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.79■□□□□ 0.6
CHST1O43916 KRT125P-201ENST00000546827 989 ntBASIC18.79■□□□□ 0.6
CHST1O43916 AC011551.1-201ENST00000614101 683 ntBASIC18.79■□□□□ 0.6
CHST1O43916 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHST1O43916 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHST1O43916 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.79■□□□□ 0.6
CHST1O43916 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHST1O43916 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CHST1O43916 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHST1O43916 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHST1O43916 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHST1O43916 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHST1O43916 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHST1O43916 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHST1O43916 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHST1O43916 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CHST1O43916 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.78■□□□□ 0.6
CHST1O43916 AC137630.3-201ENST00000607245 391 ntBASIC18.78■□□□□ 0.6
CHST1O43916 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHST1O43916 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHST1O43916 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.78■□□□□ 0.6
CHST1O43916 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHST1O43916 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
CHST1O43916 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.77■□□□□ 0.6
CHST1O43916 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CHST1O43916 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHST1O43916 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHST1O43916 MIR4787-201ENST00000607364 84 ntBASIC18.77■□□□□ 0.6
CHST1O43916 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CHST1O43916 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.77■□□□□ 0.6
CHST1O43916 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHST1O43916 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHST1O43916 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHST1O43916 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHST1O43916 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHST1O43916 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHST1O43916 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHST1O43916 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHST1O43916 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHST1O43916 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHST1O43916 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHST1O43916 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHST1O43916 AL356441.2-201ENST00000443009 864 ntBASIC18.76■□□□□ 0.59
CHST1O43916 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms