Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ARHGEF9O43307 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ARHGEF9O43307 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ARHGEF9O43307 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ARHGEF9O43307 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ARHGEF9O43307 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ARHGEF9O43307 AC087393.1-201ENST00000582896 145 ntBASIC20.83■□□□□ 0.93
ARHGEF9O43307 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ARHGEF9O43307 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
ARHGEF9O43307 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ARHGEF9O43307 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ARHGEF9O43307 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
ARHGEF9O43307 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF9O43307 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF9O43307 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF9O43307 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF9O43307 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ARHGEF9O43307 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF9O43307 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF9O43307 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF9O43307 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF9O43307 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF9O43307 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF9O43307 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF9O43307 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF9O43307 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF9O43307 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF9O43307 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF9O43307 AC103724.3-201ENST00000564481 992 ntBASIC20.81■□□□□ 0.92
ARHGEF9O43307 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF9O43307 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF9O43307 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF9O43307 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF9O43307 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ARHGEF9O43307 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF9O43307 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.8■□□□□ 0.92
ARHGEF9O43307 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.8■□□□□ 0.92
ARHGEF9O43307 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF9O43307 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF9O43307 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ARHGEF9O43307 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF9O43307 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ARHGEF9O43307 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.79■□□□□ 0.92
ARHGEF9O43307 AC004812.2-201ENST00000611079 2094 ntBASIC20.79■□□□□ 0.92
ARHGEF9O43307 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.79■□□□□ 0.92
ARHGEF9O43307 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF9O43307 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ARHGEF9O43307 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF9O43307 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.79■□□□□ 0.92
ARHGEF9O43307 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF9O43307 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.79■□□□□ 0.92
ARHGEF9O43307 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ARHGEF9O43307 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF9O43307 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF9O43307 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.79■□□□□ 0.92
ARHGEF9O43307 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.78■□□□□ 0.92
ARHGEF9O43307 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ARHGEF9O43307 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF9O43307 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF9O43307 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.78■□□□□ 0.92
ARHGEF9O43307 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.78■□□□□ 0.92
ARHGEF9O43307 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.78■□□□□ 0.92
ARHGEF9O43307 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF9O43307 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF9O43307 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF9O43307 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ARHGEF9O43307 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ARHGEF9O43307 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ARHGEF9O43307 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.77■□□□□ 0.92
ARHGEF9O43307 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ARHGEF9O43307 AC008406.3-201ENST00000620001 1374 ntBASIC20.77■□□□□ 0.92
ARHGEF9O43307 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
ARHGEF9O43307 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ARHGEF9O43307 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ARHGEF9O43307 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ARHGEF9O43307 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.77■□□□□ 0.92
ARHGEF9O43307 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ARHGEF9O43307 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ARHGEF9O43307 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
ARHGEF9O43307 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARHGEF9O43307 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ARHGEF9O43307 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.76■□□□□ 0.91
ARHGEF9O43307 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARHGEF9O43307 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARHGEF9O43307 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.76■□□□□ 0.91
ARHGEF9O43307 AC239859.2-201ENST00000444165 318 ntBASIC20.76■□□□□ 0.91
ARHGEF9O43307 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.76■□□□□ 0.91
ARHGEF9O43307 AC019171.1-201ENST00000601251 1056 ntBASIC20.76■□□□□ 0.91
ARHGEF9O43307 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ARHGEF9O43307 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARHGEF9O43307 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.76■□□□□ 0.91
ARHGEF9O43307 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARHGEF9O43307 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.75■□□□□ 0.91
ARHGEF9O43307 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ARHGEF9O43307 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.75■□□□□ 0.91
ARHGEF9O43307 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
ARHGEF9O43307 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARHGEF9O43307 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARHGEF9O43307 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ARHGEF9O43307 Z92544.1-202ENST00000571933 1220 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms