Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH17O14917 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDH17O14917 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH17O14917 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH17O14917 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDH17O14917 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDH17O14917 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PCDH17O14917 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDH17O14917 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDH17O14917 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDH17O14917 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH17O14917 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH17O14917 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH17O14917 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
PCDH17O14917 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
PCDH17O14917 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH17O14917 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDH17O14917 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH17O14917 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDH17O14917 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH17O14917 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDH17O14917 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH17O14917 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PCDH17O14917 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH17O14917 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH17O14917 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PCDH17O14917 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH17O14917 AC068473.5-201ENST00000616428 2072 ntBASIC21.56■■□□□ 1.04
PCDH17O14917 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH17O14917 AL022069.1-201ENST00000568025 1636 ntBASIC21.56■■□□□ 1.04
PCDH17O14917 ABCB10P4-201ENST00000566803 2184 ntBASIC21.56■■□□□ 1.04
PCDH17O14917 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDH17O14917 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH17O14917 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PCDH17O14917 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH17O14917 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH17O14917 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PCDH17O14917 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PCDH17O14917 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH17O14917 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH17O14917 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH17O14917 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH17O14917 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH17O14917 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH17O14917 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH17O14917 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDH17O14917 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDH17O14917 AC012676.1-201ENST00000574705 1949 ntBASIC21.55■■□□□ 1.04
PCDH17O14917 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH17O14917 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH17O14917 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH17O14917 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH17O14917 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PCDH17O14917 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH17O14917 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PCDH17O14917 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH17O14917 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH17O14917 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCDH17O14917 AC131281.2-201ENST00000520478 145 ntBASIC21.54■■□□□ 1.04
PCDH17O14917 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PCDH17O14917 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH17O14917 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH17O14917 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH17O14917 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH17O14917 AC005703.6-201ENST00000623265 1329 ntBASIC21.54■■□□□ 1.04
PCDH17O14917 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH17O14917 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDH17O14917 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH17O14917 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH17O14917 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH17O14917 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH17O14917 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDH17O14917 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDH17O14917 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDH17O14917 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH17O14917 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH17O14917 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PCDH17O14917 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDH17O14917 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH17O14917 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH17O14917 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH17O14917 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDH17O14917 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH17O14917 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH17O14917 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDH17O14917 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.52■■□□□ 1.03
PCDH17O14917 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PCDH17O14917 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH17O14917 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH17O14917 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH17O14917 AC131274.2-201ENST00000580697 1507 ntBASIC21.51■■□□□ 1.03
PCDH17O14917 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH17O14917 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
PCDH17O14917 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH17O14917 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH17O14917 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH17O14917 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PCDH17O14917 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PCDH17O14917 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH17O14917 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms