Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN4O14493 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN4O14493 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN4O14493 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.35■■□□□ 1.01
CLDN4O14493 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN4O14493 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN4O14493 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN4O14493 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.34■■□□□ 1.01
CLDN4O14493 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN4O14493 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.34■■□□□ 1.01
CLDN4O14493 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.34■■□□□ 1.01
CLDN4O14493 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.34■■□□□ 1.01
CLDN4O14493 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.34■■□□□ 1.01
CLDN4O14493 ABCB10P4-201ENST00000566803 2184 ntBASIC21.34■■□□□ 1.01
CLDN4O14493 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN4O14493 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CLDN4O14493 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
CLDN4O14493 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CLDN4O14493 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.33■■□□□ 1.01
CLDN4O14493 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLDN4O14493 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.33■■□□□ 1
CLDN4O14493 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLDN4O14493 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN4O14493 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN4O14493 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLDN4O14493 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.32■■□□□ 1
CLDN4O14493 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLDN4O14493 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.32■■□□□ 1
CLDN4O14493 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLDN4O14493 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN4O14493 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN4O14493 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN4O14493 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN4O14493 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.31■■□□□ 1
CLDN4O14493 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.31■■□□□ 1
CLDN4O14493 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.31■■□□□ 1
CLDN4O14493 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.31■■□□□ 1
CLDN4O14493 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN4O14493 AC093323.1-202ENST00000635031 2045 ntBASIC21.31■■□□□ 1
CLDN4O14493 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.3■■□□□ 1
CLDN4O14493 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.3■■□□□ 1
CLDN4O14493 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLDN4O14493 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.3■■□□□ 1
CLDN4O14493 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.3■■□□□ 1
CLDN4O14493 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.3■■□□□ 1
CLDN4O14493 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.3■■□□□ 1
CLDN4O14493 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.3■■□□□ 1
CLDN4O14493 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.3■■□□□ 1
CLDN4O14493 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.3■■□□□ 1
CLDN4O14493 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN4O14493 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN4O14493 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CLDN4O14493 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN4O14493 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN4O14493 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CLDN4O14493 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN4O14493 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.29■■□□□ 1
CLDN4O14493 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN4O14493 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.29■■□□□ 1
CLDN4O14493 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN4O14493 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN4O14493 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN4O14493 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.28■■□□□ 1
CLDN4O14493 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN4O14493 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN4O14493 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CLDN4O14493 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
CLDN4O14493 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN4O14493 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.28■■□□□ 1
CLDN4O14493 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN4O14493 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN4O14493 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN4O14493 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CLDN4O14493 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN4O14493 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLDN4O14493 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.27■■□□□ 1
CLDN4O14493 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.27■■□□□ 1
CLDN4O14493 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.27■■□□□ 1
CLDN4O14493 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.27■■□□□ 1
CLDN4O14493 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.27■■□□□ 1
CLDN4O14493 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN4O14493 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLDN4O14493 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.27■■□□□ 1
CLDN4O14493 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN4O14493 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.27■□□□□ 0.99
CLDN4O14493 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLDN4O14493 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN4O14493 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN4O14493 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN4O14493 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN4O14493 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN4O14493 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN4O14493 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLDN4O14493 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN4O14493 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CLDN4O14493 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.26■□□□□ 0.99
CLDN4O14493 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN4O14493 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN4O14493 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.26■□□□□ 0.99
CLDN4O14493 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms