Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SOX1O00570 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SOX1O00570 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.62■■□□□ 1.53
SOX1O00570 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.62■■□□□ 1.53
SOX1O00570 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
SOX1O00570 DRD5P2-201ENST00000421395 2012 ntBASIC24.62■■□□□ 1.53
SOX1O00570 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.62■■□□□ 1.53
SOX1O00570 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SOX1O00570 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SOX1O00570 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
SOX1O00570 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SOX1O00570 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SOX1O00570 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.61■■□□□ 1.53
SOX1O00570 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.61■■□□□ 1.53
SOX1O00570 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
SOX1O00570 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.61■■□□□ 1.53
SOX1O00570 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.6■■□□□ 1.53
SOX1O00570 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.6■■□□□ 1.53
SOX1O00570 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
SOX1O00570 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.6■■□□□ 1.53
SOX1O00570 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SOX1O00570 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SOX1O00570 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
SOX1O00570 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.59■■□□□ 1.53
SOX1O00570 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.59■■□□□ 1.53
SOX1O00570 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SOX1O00570 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.59■■□□□ 1.53
SOX1O00570 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SOX1O00570 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.59■■□□□ 1.53
SOX1O00570 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.59■■□□□ 1.53
SOX1O00570 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.59■■□□□ 1.53
SOX1O00570 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SOX1O00570 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SOX1O00570 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.58■■□□□ 1.53
SOX1O00570 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
SOX1O00570 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SOX1O00570 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.58■■□□□ 1.52
SOX1O00570 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
SOX1O00570 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SOX1O00570 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SOX1O00570 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
SOX1O00570 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.57■■□□□ 1.52
SOX1O00570 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.57■■□□□ 1.52
SOX1O00570 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SOX1O00570 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SOX1O00570 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.56■■□□□ 1.52
SOX1O00570 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.56■■□□□ 1.52
SOX1O00570 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.56■■□□□ 1.52
SOX1O00570 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.56■■□□□ 1.52
SOX1O00570 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
SOX1O00570 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SOX1O00570 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
SOX1O00570 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SOX1O00570 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.55■■□□□ 1.52
SOX1O00570 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SOX1O00570 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SOX1O00570 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.54■■□□□ 1.52
SOX1O00570 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
SOX1O00570 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.54■■□□□ 1.52
SOX1O00570 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SOX1O00570 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SOX1O00570 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
SOX1O00570 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC24.53■■□□□ 1.52
SOX1O00570 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.53■■□□□ 1.52
SOX1O00570 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SOX1O00570 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.53■■□□□ 1.52
SOX1O00570 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.53■■□□□ 1.52
SOX1O00570 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.52■■□□□ 1.52
SOX1O00570 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SOX1O00570 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SOX1O00570 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
SOX1O00570 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.52■■□□□ 1.52
SOX1O00570 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SOX1O00570 CBFB-203ENST00000561924 584 ntTSL 5 BASIC24.52■■□□□ 1.52
SOX1O00570 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.52■■□□□ 1.52
SOX1O00570 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SOX1O00570 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.51■■□□□ 1.51
SOX1O00570 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SOX1O00570 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.51■■□□□ 1.51
SOX1O00570 AC069152.1-201ENST00000438030 544 ntBASIC24.51■■□□□ 1.51
SOX1O00570 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SOX1O00570 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SOX1O00570 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.51■■□□□ 1.51
SOX1O00570 AC131274.2-201ENST00000580697 1507 ntBASIC24.51■■□□□ 1.51
SOX1O00570 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.5■■□□□ 1.51
SOX1O00570 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.5■■□□□ 1.51
SOX1O00570 TSPY6P-201ENST00000448518 926 ntBASIC24.5■■□□□ 1.51
SOX1O00570 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SOX1O00570 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.5■■□□□ 1.51
SOX1O00570 AL138781.1-201ENST00000566567 1274 ntBASIC24.5■■□□□ 1.51
SOX1O00570 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SOX1O00570 AC011767.1-201ENST00000617410 1153 ntBASIC24.5■■□□□ 1.51
SOX1O00570 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.5■■□□□ 1.51
SOX1O00570 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SOX1O00570 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
SOX1O00570 AP004607.4-201ENST00000530158 1459 ntBASIC24.5■■□□□ 1.51
SOX1O00570 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SOX1O00570 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.49■■□□□ 1.51
SOX1O00570 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.49■■□□□ 1.51
SOX1O00570 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms