Protein–RNA interactions for Protein: B4DS77

SHISA9, Protein shisa-9, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9B4DS77 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.49■□□□□ 0.71
SHISA9B4DS77 AF213884.3-201ENST00000563833 479 ntBASIC19.49■□□□□ 0.71
SHISA9B4DS77 AL138724.1-201ENST00000606771 1088 ntBASIC19.49■□□□□ 0.71
SHISA9B4DS77 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.49■□□□□ 0.71
SHISA9B4DS77 AL136967.2-201ENST00000623968 743 ntBASIC19.49■□□□□ 0.71
SHISA9B4DS77 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHISA9B4DS77 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SHISA9B4DS77 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SHISA9B4DS77 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SHISA9B4DS77 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA9B4DS77 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA9B4DS77 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA9B4DS77 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.48■□□□□ 0.71
SHISA9B4DS77 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA9B4DS77 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA9B4DS77 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA9B4DS77 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA9B4DS77 AC006455.2-201ENST00000429931 906 ntBASIC19.48■□□□□ 0.71
SHISA9B4DS77 AP001330.3-201ENST00000520123 633 ntBASIC19.48■□□□□ 0.71
SHISA9B4DS77 AC011298.3-201ENST00000615796 283 ntBASIC19.48■□□□□ 0.71
SHISA9B4DS77 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA9B4DS77 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA9B4DS77 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA9B4DS77 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA9B4DS77 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA9B4DS77 MIR939-201ENST00000401314 82 ntBASIC19.47■□□□□ 0.71
SHISA9B4DS77 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA9B4DS77 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.47■□□□□ 0.71
SHISA9B4DS77 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SHISA9B4DS77 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.47■□□□□ 0.71
SHISA9B4DS77 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA9B4DS77 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.47■□□□□ 0.71
SHISA9B4DS77 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA9B4DS77 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.46■□□□□ 0.71
SHISA9B4DS77 AC020928.2-201ENST00000588717 2197 ntBASIC19.46■□□□□ 0.71
SHISA9B4DS77 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SHISA9B4DS77 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA9B4DS77 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.46■□□□□ 0.71
SHISA9B4DS77 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.46■□□□□ 0.71
SHISA9B4DS77 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.46■□□□□ 0.71
SHISA9B4DS77 AC009086.3-201ENST00000623486 1008 ntBASIC19.46■□□□□ 0.71
SHISA9B4DS77 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.46■□□□□ 0.71
SHISA9B4DS77 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA9B4DS77 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA9B4DS77 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA9B4DS77 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.46■□□□□ 0.71
SHISA9B4DS77 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA9B4DS77 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.45■□□□□ 0.7
SHISA9B4DS77 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA9B4DS77 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA9B4DS77 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.45■□□□□ 0.7
SHISA9B4DS77 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SHISA9B4DS77 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.45■□□□□ 0.7
SHISA9B4DS77 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.45■□□□□ 0.7
SHISA9B4DS77 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA9B4DS77 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA9B4DS77 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA9B4DS77 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.45■□□□□ 0.7
SHISA9B4DS77 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA9B4DS77 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHISA9B4DS77 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA9B4DS77 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA9B4DS77 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SHISA9B4DS77 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA9B4DS77 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA9B4DS77 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA9B4DS77 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.44■□□□□ 0.7
SHISA9B4DS77 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA9B4DS77 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.44■□□□□ 0.7
SHISA9B4DS77 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.44■□□□□ 0.7
SHISA9B4DS77 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SHISA9B4DS77 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHISA9B4DS77 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.44■□□□□ 0.7
SHISA9B4DS77 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA9B4DS77 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA9B4DS77 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SHISA9B4DS77 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SHISA9B4DS77 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.43■□□□□ 0.7
SHISA9B4DS77 AC105265.2-201ENST00000467189 838 ntBASIC19.43■□□□□ 0.7
SHISA9B4DS77 AC091305.1-201ENST00000479476 895 ntBASIC19.43■□□□□ 0.7
SHISA9B4DS77 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SHISA9B4DS77 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHISA9B4DS77 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.43■□□□□ 0.7
SHISA9B4DS77 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA9B4DS77 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA9B4DS77 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA9B4DS77 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.42■□□□□ 0.7
SHISA9B4DS77 MIR3181-201ENST00000578512 73 ntBASIC19.42■□□□□ 0.7
SHISA9B4DS77 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.42■□□□□ 0.7
SHISA9B4DS77 AC136469.2-201ENST00000623944 1028 ntBASIC19.42■□□□□ 0.7
SHISA9B4DS77 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA9B4DS77 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SHISA9B4DS77 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA9B4DS77 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA9B4DS77 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHISA9B4DS77 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.42■□□□□ 0.7
SHISA9B4DS77 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.42■□□□□ 0.7
SHISA9B4DS77 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.41■□□□□ 0.7
SHISA9B4DS77 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.41■□□□□ 0.7
SHISA9B4DS77 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms