Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC31.2■■■□□ 2.59
SBNO1A3KN83 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC31.2■■■□□ 2.59
SBNO1A3KN83 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC31.2■■■□□ 2.59
SBNO1A3KN83 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SBNO1A3KN83 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
SBNO1A3KN83 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.19■■■□□ 2.58
SBNO1A3KN83 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SBNO1A3KN83 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SBNO1A3KN83 TSPY26P-201ENST00000476365 1326 ntBASIC31.19■■■□□ 2.58
SBNO1A3KN83 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC31.18■■■□□ 2.58
SBNO1A3KN83 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC31.18■■■□□ 2.58
SBNO1A3KN83 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SBNO1A3KN83 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC31.18■■■□□ 2.58
SBNO1A3KN83 AC126544.1-201ENST00000580842 1059 ntBASIC31.18■■■□□ 2.58
SBNO1A3KN83 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SBNO1A3KN83 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SBNO1A3KN83 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
SBNO1A3KN83 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
SBNO1A3KN83 NME4-202ENST00000382940 766 ntTSL 3 BASIC31.17■■■□□ 2.58
SBNO1A3KN83 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
SBNO1A3KN83 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC31.17■■■□□ 2.58
SBNO1A3KN83 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.17■■■□□ 2.58
SBNO1A3KN83 NME4-211ENST00000620944 1193 ntTSL 2 BASIC31.17■■■□□ 2.58
SBNO1A3KN83 AL358852.1-201ENST00000623174 1268 ntBASIC31.17■■■□□ 2.58
SBNO1A3KN83 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.17■■■□□ 2.58
SBNO1A3KN83 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SBNO1A3KN83 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SBNO1A3KN83 SLC6A10P-202ENST00000431994 2058 ntBASIC31.17■■■□□ 2.58
SBNO1A3KN83 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC31.17■■■□□ 2.58
SBNO1A3KN83 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SBNO1A3KN83 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SBNO1A3KN83 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
SBNO1A3KN83 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
SBNO1A3KN83 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SBNO1A3KN83 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC31.17■■■□□ 2.58
SBNO1A3KN83 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
SBNO1A3KN83 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC31.16■■■□□ 2.58
SBNO1A3KN83 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SBNO1A3KN83 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SBNO1A3KN83 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
SBNO1A3KN83 GTSE1-AS1-202ENST00000623117 1518 ntBASIC31.16■■■□□ 2.58
SBNO1A3KN83 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SBNO1A3KN83 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC31.16■■■□□ 2.58
SBNO1A3KN83 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SBNO1A3KN83 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC31.15■■■□□ 2.58
SBNO1A3KN83 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC31.15■■■□□ 2.58
SBNO1A3KN83 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC31.15■■■□□ 2.58
SBNO1A3KN83 ID1-201ENST00000376105 1233 ntBASIC31.15■■■□□ 2.58
SBNO1A3KN83 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SBNO1A3KN83 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC31.15■■■□□ 2.58
SBNO1A3KN83 DLX3-202ENST00000512495 834 ntTSL 2 BASIC31.15■■■□□ 2.58
SBNO1A3KN83 AICDA-202ENST00000537228 667 ntTSL 5 BASIC31.15■■■□□ 2.58
SBNO1A3KN83 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SBNO1A3KN83 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.14■■■□□ 2.58
SBNO1A3KN83 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC31.14■■■□□ 2.58
SBNO1A3KN83 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC31.14■■■□□ 2.58
SBNO1A3KN83 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
SBNO1A3KN83 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.14■■■□□ 2.58
SBNO1A3KN83 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SBNO1A3KN83 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC31.13■■■□□ 2.57
SBNO1A3KN83 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC31.13■■■□□ 2.57
SBNO1A3KN83 pRNA.6-201ENST00000610482 90 ntBASIC31.13■■■□□ 2.57
SBNO1A3KN83 pRNA.5-201ENST00000612139 90 ntBASIC31.13■■■□□ 2.57
SBNO1A3KN83 pRNA.11-201ENST00000618423 90 ntBASIC31.13■■■□□ 2.57
SBNO1A3KN83 pRNA.13-201ENST00000619112 90 ntBASIC31.13■■■□□ 2.57
SBNO1A3KN83 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
SBNO1A3KN83 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SBNO1A3KN83 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC31.12■■■□□ 2.57
SBNO1A3KN83 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SBNO1A3KN83 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SBNO1A3KN83 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
SBNO1A3KN83 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SBNO1A3KN83 AC004911.1-201ENST00000416316 871 ntBASIC31.11■■■□□ 2.57
SBNO1A3KN83 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC31.11■■■□□ 2.57
SBNO1A3KN83 IGHV3-19-201ENST00000521488 291 ntBASIC31.11■■■□□ 2.57
SBNO1A3KN83 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC31.11■■■□□ 2.57
SBNO1A3KN83 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SBNO1A3KN83 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SBNO1A3KN83 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SBNO1A3KN83 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC31.1■■■□□ 2.57
SBNO1A3KN83 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SBNO1A3KN83 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SBNO1A3KN83 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
SBNO1A3KN83 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
SBNO1A3KN83 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
SBNO1A3KN83 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SBNO1A3KN83 DENND3-207ENST00000518347 850 ntTSL 2 BASIC31.09■■■□□ 2.57
SBNO1A3KN83 AC012414.1-201ENST00000556676 535 ntBASIC31.09■■■□□ 2.57
SBNO1A3KN83 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
SBNO1A3KN83 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC31.09■■■□□ 2.57
SBNO1A3KN83 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC31.09■■■□□ 2.57
SBNO1A3KN83 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
SBNO1A3KN83 MIR572-201ENST00000384983 95 ntBASIC31.08■■■□□ 2.57
SBNO1A3KN83 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SBNO1A3KN83 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.08■■■□□ 2.57
SBNO1A3KN83 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.08■■■□□ 2.57
SBNO1A3KN83 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
SBNO1A3KN83 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
SBNO1A3KN83 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
SBNO1A3KN83 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms