Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC189A1A4V9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC189A1A4V9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CCDC189A1A4V9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC189A1A4V9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC189A1A4V9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.58■■□□□ 1.21
CCDC189A1A4V9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
CCDC189A1A4V9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCDC189A1A4V9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CCDC189A1A4V9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.58■■□□□ 1.2
CCDC189A1A4V9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCDC189A1A4V9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CCDC189A1A4V9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC189A1A4V9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC189A1A4V9 AC074183.2-201ENST00000623112 922 ntBASIC22.57■■□□□ 1.2
CCDC189A1A4V9 DUSP8P5-201ENST00000422884 1815 ntBASIC22.57■■□□□ 1.2
CCDC189A1A4V9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC189A1A4V9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC189A1A4V9 AL022069.1-201ENST00000568025 1636 ntBASIC22.57■■□□□ 1.2
CCDC189A1A4V9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC189A1A4V9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC189A1A4V9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC189A1A4V9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC189A1A4V9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC189A1A4V9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC189A1A4V9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC189A1A4V9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC189A1A4V9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC189A1A4V9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC189A1A4V9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC189A1A4V9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.55■■□□□ 1.2
CCDC189A1A4V9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC189A1A4V9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC189A1A4V9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.55■■□□□ 1.2
CCDC189A1A4V9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC189A1A4V9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC189A1A4V9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CCDC189A1A4V9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC189A1A4V9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CCDC189A1A4V9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC189A1A4V9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC189A1A4V9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC189A1A4V9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC189A1A4V9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC189A1A4V9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC189A1A4V9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC189A1A4V9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC189A1A4V9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
CCDC189A1A4V9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
CCDC189A1A4V9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC189A1A4V9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC189A1A4V9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC189A1A4V9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC189A1A4V9 AC139795.1-202ENST00000500444 432 ntBASIC22.53■■□□□ 1.2
CCDC189A1A4V9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC189A1A4V9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC189A1A4V9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC189A1A4V9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC189A1A4V9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC189A1A4V9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC189A1A4V9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC189A1A4V9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC189A1A4V9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC189A1A4V9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC189A1A4V9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.51■■□□□ 1.19
CCDC189A1A4V9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC189A1A4V9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC189A1A4V9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC189A1A4V9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC189A1A4V9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC189A1A4V9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC189A1A4V9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC189A1A4V9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC189A1A4V9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC189A1A4V9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.5■■□□□ 1.19
CCDC189A1A4V9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC189A1A4V9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC189A1A4V9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CCDC189A1A4V9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC189A1A4V9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.49■■□□□ 1.19
CCDC189A1A4V9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC189A1A4V9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CCDC189A1A4V9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CCDC189A1A4V9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC189A1A4V9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC189A1A4V9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC189A1A4V9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms