Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF103-CHMP3A0A140T963 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.07
RNF103-CHMP3A0A140T963 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
RNF103-CHMP3A0A140T963 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF103-CHMP3A0A140T963 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF103-CHMP3A0A140T963 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF103-CHMP3A0A140T963 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
RNF103-CHMP3A0A140T963 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF103-CHMP3A0A140T963 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF103-CHMP3A0A140T963 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF103-CHMP3A0A140T963 EP400NL-214ENST00000641289 2402 ntBASIC21.7■■□□□ 1.06
RNF103-CHMP3A0A140T963 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF103-CHMP3A0A140T963 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.7■■□□□ 1.06
RNF103-CHMP3A0A140T963 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF103-CHMP3A0A140T963 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF103-CHMP3A0A140T963 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF103-CHMP3A0A140T963 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF103-CHMP3A0A140T963 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF103-CHMP3A0A140T963 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RNF103-CHMP3A0A140T963 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF103-CHMP3A0A140T963 NTF6A-201ENST00000591175 560 ntBASIC21.69■■□□□ 1.06
RNF103-CHMP3A0A140T963 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF103-CHMP3A0A140T963 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
RNF103-CHMP3A0A140T963 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF103-CHMP3A0A140T963 LINC00565-201ENST00000562710 2331 ntBASIC21.69■■□□□ 1.06
RNF103-CHMP3A0A140T963 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RNF103-CHMP3A0A140T963 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RNF103-CHMP3A0A140T963 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RNF103-CHMP3A0A140T963 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF103-CHMP3A0A140T963 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF103-CHMP3A0A140T963 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF103-CHMP3A0A140T963 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RNF103-CHMP3A0A140T963 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF103-CHMP3A0A140T963 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF103-CHMP3A0A140T963 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF103-CHMP3A0A140T963 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF103-CHMP3A0A140T963 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF103-CHMP3A0A140T963 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF103-CHMP3A0A140T963 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF103-CHMP3A0A140T963 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF103-CHMP3A0A140T963 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF103-CHMP3A0A140T963 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF103-CHMP3A0A140T963 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF103-CHMP3A0A140T963 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF103-CHMP3A0A140T963 AC139795.1-202ENST00000500444 432 ntBASIC21.67■■□□□ 1.06
RNF103-CHMP3A0A140T963 DUX4L18-201ENST00000553347 1267 ntBASIC21.67■■□□□ 1.06
RNF103-CHMP3A0A140T963 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF103-CHMP3A0A140T963 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF103-CHMP3A0A140T963 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF103-CHMP3A0A140T963 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF103-CHMP3A0A140T963 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RNF103-CHMP3A0A140T963 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF103-CHMP3A0A140T963 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF103-CHMP3A0A140T963 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF103-CHMP3A0A140T963 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.66■■□□□ 1.06
RNF103-CHMP3A0A140T963 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF103-CHMP3A0A140T963 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF103-CHMP3A0A140T963 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF103-CHMP3A0A140T963 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF103-CHMP3A0A140T963 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF103-CHMP3A0A140T963 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF103-CHMP3A0A140T963 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF103-CHMP3A0A140T963 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF103-CHMP3A0A140T963 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF103-CHMP3A0A140T963 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF103-CHMP3A0A140T963 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF103-CHMP3A0A140T963 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF103-CHMP3A0A140T963 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF103-CHMP3A0A140T963 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RNF103-CHMP3A0A140T963 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.64■■□□□ 1.06
RNF103-CHMP3A0A140T963 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.64■■□□□ 1.06
RNF103-CHMP3A0A140T963 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RNF103-CHMP3A0A140T963 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF103-CHMP3A0A140T963 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF103-CHMP3A0A140T963 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF103-CHMP3A0A140T963 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF103-CHMP3A0A140T963 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF103-CHMP3A0A140T963 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF103-CHMP3A0A140T963 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF103-CHMP3A0A140T963 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF103-CHMP3A0A140T963 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RNF103-CHMP3A0A140T963 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF103-CHMP3A0A140T963 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF103-CHMP3A0A140T963 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.63■■□□□ 1.05
RNF103-CHMP3A0A140T963 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF103-CHMP3A0A140T963 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF103-CHMP3A0A140T963 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF103-CHMP3A0A140T963 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF103-CHMP3A0A140T963 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF103-CHMP3A0A140T963 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF103-CHMP3A0A140T963 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF103-CHMP3A0A140T963 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF103-CHMP3A0A140T963 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms